Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1890 |
Symbol | hisF |
ID | 5595955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 2014108 |
End bp | 2014863 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640930555 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001467820 |
Protein GI | 157164967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATCATT TTGCAAAACG CATAATCCCA TGCCTTGACG TAAAAGATGG CAGGGTCGTA AAAGGTGTAA ATTTTGTTGG ACTTGTCGAT GCTGGAGACC CAGTCGAGAT AGCTAAAAGA TACAACGATG AGGGCGCTGA CGAGCTTTGC TTTTTGGATA TCACAGCCTC TCACCTTGGC CGTGATACGA TAGTTGATGT GGTAAAAAAG GTCGCAAGCA AGCTTTTTAT ACCCCTAACC GTTGGTGGAG GCATACGCAC GATAGATGAT ATCTCACGCC TTTTAAATGC GGGCTGCGAC AAGGTGAGCC TAAACTCATC GGCGATAAAA GATCCAAATT TGATCGACGA AGCGGCTAAG AAATTTGGCT CGCAATGTGT CGTCGTAGCG ATCGACGCTA AAAAGATCGA AAATGGTTAT AGTGTTTTTA TAAATGGTGG CAGGATCGAC ACTAAAAAAG ATGCCTTTTC TTGGGCAAAA GAGGTCGAGT CGCGTGGGGC AGGGGAGATA TTACTAACGT CTATGGATAA CGACGGCGTC AAGCAGGGCT TTAGTCTGGA GCTAACAAAG ATCTTTAGCG CGCTTTCTAT ACCGACTATC GCAAGCGGTG GTGCTGGCAA GATGGAGCAT TTTAAGGATG CTTTTGAGGT TGGGGCTGAT GCGTGTCTTG CTGCTTCGAT ATTTCACTTT GGCGAGATCG AGATAAAAAA GCTAAAAGAG TATCTTAAGG CAAATGGCGT TGAGGTTAGG CTCTGA
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Protein sequence | MNHFAKRIIP CLDVKDGRVV KGVNFVGLVD AGDPVEIAKR YNDEGADELC FLDITASHLG RDTIVDVVKK VASKLFIPLT VGGGIRTIDD ISRLLNAGCD KVSLNSSAIK DPNLIDEAAK KFGSQCVVVA IDAKKIENGY SVFINGGRID TKKDAFSWAK EVESRGAGEI LLTSMDNDGV KQGFSLELTK IFSALSIPTI ASGGAGKMEH FKDAFEVGAD ACLAASIFHF GEIEIKKLKE YLKANGVEVR L
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