Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1888 |
Symbol | ksgA |
ID | 5597125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 2018251 |
End bp | 2019093 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640930557 |
Product | dimethyladenosine transferase |
Protein accession | YP_001467822 |
Protein GI | 157163959 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAAGG CAAAAAAGCA CTTTGGACAG AATTTTTTAC AAGACAAAGC GACACTAGAT AAGATCATCC AAGCGATACC CAAGGACGTA GAAAACGTCG TTGAGATTGG GCCTGGCTTA GGTGATTTGA CATTTAGACT TTTGCAAATT TATAAGACGA CCTCTTTTGA GATAGATCGT GAGCTGTTTC AAATTTTAAA GGTCAAATTT GCAAATGAGA TCCAAAATGG ACAATTAAAA CTTTTTTGTA AAGATGCTTT AGAGCAGTGG CAGCAAGAGG GCGGACTAAG TAGCGAAAAC TACTTTTTAG TCGCAAATTT GCCCTATTAC GTTGCTACGA AGATGATACT AAATGCGATA GATGACGAAA AATGTCTTGG GCTTATCGTG ATGATACAAA AAGAGGTTGC TCTTAAATTT AGTGCAAAGA GCAAGGATAA AGAATTTAGC GCTTTATCGA TCCTCGCTTC ACTTCAAGGC AGGTGTGAGC TTTTGTTTGA TGTGGATGCA AAGCTTTTTA ATCCACCTCC AAAGGTCACA TCCTCAGTCA TCAAACTACA AAAAACAAAA AAGATTTTTG GCAAAGACGG GATTTTCAAA GATGCAAAAC AATACGAGGC TTTTAAAGCA TTTTTAAGAG CTGCGTTTGC TTCGCCAAGA AAGACGCTTT TGAAAAATTT ATCCACAAAT TTTGACAAAA AGGCGTTAGA AGAAATTTTT GAAAATATGA ACTTAGCCAC AAATTTACGT CCACATGAGC TAGATGTCGA TTCTTATCTA AAGATATTTG AGATTACAAA GGAAGATAAT GAACGACAAA AACGAAGAGA AAGTTGTAAC TAA
|
Protein sequence | MIKAKKHFGQ NFLQDKATLD KIIQAIPKDV ENVVEIGPGL GDLTFRLLQI YKTTSFEIDR ELFQILKVKF ANEIQNGQLK LFCKDALEQW QQEGGLSSEN YFLVANLPYY VATKMILNAI DDEKCLGLIV MIQKEVALKF SAKSKDKEFS ALSILASLQG RCELLFDVDA KLFNPPPKVT SSVIKLQKTK KIFGKDGIFK DAKQYEAFKA FLRAAFASPR KTLLKNLSTN FDKKALEEIF ENMNLATNLR PHELDVDSYL KIFEITKEDN ERQKRRESCN
|
| |