Gene CCC13826_1871 details

Gene Information

• Locus tag: CCC13826_1871
• ID: 5597337
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: -
• Start bp: 2033992
• End bp: 2036058
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640930573
• Product: tRNA synthetase, class II
• Protein accession: YP_001467838
• Protein GI: 157165065

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGAAACT TACACAAAGC CTTAGCAGGC TTACTCATGG GTGTTAGTAT CTTTGCTTCA 
CAAGCCTGTT GCGAAGAGCA TAATATGCAG ATGTCCGATA AAGCACGTGA TGTTATCGCA 
AATCCTAAAG GCACACTGCA AAGTAGAGGT GTTGTCTCCT TGCAAGACTA CGTCGTAGAA 
GAGCAAGAGA TGTATAACTG GCTATTTAAA AACCACCCTA TTTTTACAAA GTATGGTGGC 
AAAACCGTCG GCAAAATGGT CGTTCATGAC CGTGGCCTAG AGTGGCTTGC CGAGGGACAT 
GGCTTTGATA TGTCAAAGCT TAGTAAAAGA GATGGTGGTA AGGGCTATAG CTCTATGATG 
TATAGAATTC CAGCCACCTC ATCACTTCAG TTTCCTAATA AATTTGTAGG ACCAGAAAAG 
TGCGGTGAGT GTCACCCAGC TCAGTATGAG GTCTGGAGCA GATCTCGCCA CGCAACTACT 
ATGCGCTTCC CTGGCGAGCA CCCAGAGGTT AATAACAACC TAACTGAGCC AGTATTTGAC 
AAAGATACCG CTTCTATCCT TCCAAAAGGT ATCACTCCAG ATGTCATCTA CGCAACCGTT 
GGTCACTTAA GAACTAAGAT GGGCTACGTC GATGCATGGC TACTTCGTGG TACTTACTAT 
GTTGAGGGCG GTTTGCTAAG AGATGGCACA GGTCAGATCG TAGCTGGCGG TAACCAATGG 
CAAAGAACAT GGGCGTTAAA TTTAGACGAC GCAACTGTTA AAAAGATAAA AGAGCTCGTC 
CCAGAATTTC CTGGCACGCT TGAAGAGTAT GGCGATAATG GCGGATATGT CAGAGGTCTT 
GCCTCATACG CCGCAAAACA TAAAAAGTCG ATGTTTTTCC AAGCAAACTC ATCATATTGT 
GAGGTTTGTC ACCCAGTTAA ATTTGACTTT AAGTCAAAAG CAGAATTTTA CGCAGCACTT 
GGTAATGCCA AAGAGCTTCA AAAACACACT ATCTCAAAAG GCGTAAGCTG TGAGGAGTGC 
CACGGAGCTG GCGGTCACCT TGATGGAGCT ACAAATTTTA GAACATCAAA CTGCGAACGC 
TGTCACCAAA GATTTAACTT TAGCCCAGAT CTAATGCGAG CTAACCCACT TAATAACGGC 
AAGCTTGATC TTTCTTTAAG CTCTAAATTT AAATCAATGG GACCAGGATG CGGTTCTGAG 
GGCTCTCAAT CATACTTTAC CGCTCACTAC GATAAAGGTA TGAGATGCGT CACTTGCCAC 
GATCCACACG ACAACACAGG TAACGTCGTA GGCGATAAGA GCGTAACTGG AATGAACTAC 
AACCCAGATC AAGGCTATCT AAGTGCGTTC TACACTAAAC CAAAGATCAA AAAAGATTGT 
AAAGATTGTC ACGAGACTCA AGCATATATC GCATCAAAAG CAGATACTCA CAAAAACAAC 
ACTTGTGCAT CTTGCCACAT GCCATTTATG ATGAGTTGTG AGAATTTCTA CGCTGTTCAG 
TTCCAAGACA ACGCTGGCTT TGATACTCAA AGACGCTCTC ACATCTGGAA GATCATGGTC 
GATCCAAAAG AGAAATCTCT TGTTCCAGGC GACGCTGCTA AAGGTCCAAG AGATGCTAAA 
GATTGGCACT TTGAGAGAGA TAAAAATGGC CACAACTATG TTGATTTGAT GTGGGCATGC 
GCTAGAACAT CTTGGGCTGA TAAAGATATG AAAGATAATA AAGGCTGCCA TAGCCCAGTG 
CTATCTGAGC TAAAACCAAC ACTTCATTTT AAAAACCAAA AACAAGTTTA TGATGAGGTT 
ATGGGATGGC AAACTCCAGT TAAGAATGAA TTCTCAGAGG TCAAAATAGG CATCGAGGGA 
ATTTACTCAC TACTAGAGAC TAAAAAGCTA GATCCAAGTG ATAAAGCAAG AGTTTATGAG 
CTTGTCCAAA ACGCTCAAGA GATCATCGAT ATGGTCGAAA AAGATGGTTC GTGGGGTATG 
CACGGATTTA AATTTACTAA ACAAAGACTA GATGCATCTA AAGAGTATAT AAAAGAAGCT 
CAGAGAATTC TAAACAAAAA TTTATAG 

 

Protein sequence

MRNLHKALAG LLMGVSIFAS QACCEEHNMQ MSDKARDVIA NPKGTLQSRG VVSLQDYVVE 
EQEMYNWLFK NHPIFTKYGG KTVGKMVVHD RGLEWLAEGH GFDMSKLSKR DGGKGYSSMM 
YRIPATSSLQ FPNKFVGPEK CGECHPAQYE VWSRSRHATT MRFPGEHPEV NNNLTEPVFD 
KDTASILPKG ITPDVIYATV GHLRTKMGYV DAWLLRGTYY VEGGLLRDGT GQIVAGGNQW 
QRTWALNLDD ATVKKIKELV PEFPGTLEEY GDNGGYVRGL ASYAAKHKKS MFFQANSSYC 
EVCHPVKFDF KSKAEFYAAL GNAKELQKHT ISKGVSCEEC HGAGGHLDGA TNFRTSNCER 
CHQRFNFSPD LMRANPLNNG KLDLSLSSKF KSMGPGCGSE GSQSYFTAHY DKGMRCVTCH 
DPHDNTGNVV GDKSVTGMNY NPDQGYLSAF YTKPKIKKDC KDCHETQAYI ASKADTHKNN 
TCASCHMPFM MSCENFYAVQ FQDNAGFDTQ RRSHIWKIMV DPKEKSLVPG DAAKGPRDAK 
DWHFERDKNG HNYVDLMWAC ARTSWADKDM KDNKGCHSPV LSELKPTLHF KNQKQVYDEV 
MGWQTPVKNE FSEVKIGIEG IYSLLETKKL DPSDKARVYE LVQNAQEIID MVEKDGSWGM 
HGFKFTKQRL DASKEYIKEA QRILNKNL