| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1865 |
|---|
| Symbol | |
|---|
| ID | 5596787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 2041068 |
|---|
| End bp | 2042435 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640930577 |
|---|
| Product | citrate transporter |
|---|
| Protein accession | YP_001467842 |
|---|
| Protein GI | 157164872 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2056] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTCT TTAACCCTGT TGTTTTTAGC ATTTTGGTGA TGACAGTGCT ATGTTTGCTG
CGCTTTAACA TCCTACTTTC TATCCTCATC TCAGCACTTG TTGCTGGGGT TATGTATAAG
CATGGTTTTA GCGGATTTGA AAGTGGCTTT ACAAGCGGCA TAGATAGCTT TTTCACAGCT
TTAAAAGAGA CCACGCAAAG CCTCATAAGC GGCATGCAAG GCAATCTTGA GACCTCGCTA
AGCTACATCT TGCTAGGTGC TCTTGCAGCT GCCATAGCAA ATACAAATTT AACAGCCATT
TTGATAAATG CAATGAGTAA ATTTCTTAGC TCAAATAAGG TTATTTTTAC ACTAACTATC
GCATTTATCG CTTGCTTGTC TCAAAACTTG ATCCCAGTTC ATATAGCCTT TATACCTATC
TTGATCCCAC CACTTCTTGC TCTTATGAAT AAGATGGGTA TAGACAGACG TGCGGTGGCT
TGCGCTCTTA CATTTGGTCT GCAAGCGCCT TATGTGAGCC TTAGCGTTGG CTTTGGTCTG
CTTTTTCACA ATATCCTTAA AAAAGAGCTA GCAAACAACG GCATAAATAC AACTATCTCA
GACATCTCAT CAGTCATGTG GATCGGCGGT GCGTCGATGT TAGTTGGTCT TATCATCGCC
ATTTTTGTCT ACGGCAGAAA GAGAATTTAT AAAACATCTA AATTTGAAAA AGCCGAGCTT
GACGAGATCG AGCGCGCAAA AAGCCTTGAG ATGACTAAAA AAGAGTGGGC GGTCTTAGCT
GGTGCGGTTG TCGCCTTTGT CGTGCAAATT TATACTTCGC TCTTGCCACT TGGCGCGCTA
CTTGGACTTT TGGTCATGGT CGTTTTTGGA GGCATCGAAT ACAAAAAAGT AGATAAGATC
ATGGATAATG GCCTTGCTAT GATGGGCTTT ATCGCATTTA TCATGCTTGT TGCTGCGGGA
TATGGCACCA TTTTAAGAGA GAGTGGCGGT ATAGACGAGC TTGTAAAATA CGCTAGCTTG
GTATCTGGCG GCAAGATAGG CGGAGCACTT TTGATGTTAC TTATCGGACT TTTAGTCACG
ATGGGCATAG GCACTAGCTT TGGCACTATC CCTATCTTAG CCTCTATCTA CGTACCGCTT
TGCCTTAGCC TTGGCTTTGG TGTGCCAGCT ATCATCTTGC TAGTTGGCAT AGCAGCAGCT
CTAGGCGACG CTGGAAGCCC AGCAAGCGAC AGCACACTTG GACCAACGAG CGGTCTAAAC
GCTGATGGTG AGCACAACCA CATATATGAT ACTTGCGTGC CTACATTTAT ATTTTTCAAC
ATCCCACTTA TCATCGGTGG CGTCGTAGGT GCGTTGATAC TTGGATAA
|
|---|
| Protein sequence | MLLFNPVVFS ILVMTVLCLL RFNILLSILI SALVAGVMYK HGFSGFESGF TSGIDSFFTA
LKETTQSLIS GMQGNLETSL SYILLGALAA AIANTNLTAI LINAMSKFLS SNKVIFTLTI
AFIACLSQNL IPVHIAFIPI LIPPLLALMN KMGIDRRAVA CALTFGLQAP YVSLSVGFGL
LFHNILKKEL ANNGINTTIS DISSVMWIGG ASMLVGLIIA IFVYGRKRIY KTSKFEKAEL
DEIERAKSLE MTKKEWAVLA GAVVAFVVQI YTSLLPLGAL LGLLVMVVFG GIEYKKVDKI
MDNGLAMMGF IAFIMLVAAG YGTILRESGG IDELVKYASL VSGGKIGGAL LMLLIGLLVT
MGIGTSFGTI PILASIYVPL CLSLGFGVPA IILLVGIAAA LGDAGSPASD STLGPTSGLN
ADGEHNHIYD TCVPTFIFFN IPLIIGGVVG ALILG
|
|---|
| |