Gene CCC13826_1861 details

Gene Information

• Locus tag: CCC13826_1861
• Symbol: thyX
• ID: 5596194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 2045657
• End bp: 2046313
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640930581
• Product: FAD-dependent thymidylate synthase
• Protein accession: YP_001467846
• Protein GI: 157164602
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1351] Predicted alternative thymidylate synthase
• TIGRFAM ID: [TIGR02170] thymidylate synthase, flavin-dependent

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.224616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAAA ATTTCACAAA AAGAGAAAAT ATGCAAGTAA CACTTCTAAA TCACACCCCA 
CTAAATATCT GCTCTCACGC GATCCGCACA TGCTGGCAAA GCTTTGAAAA AGGCGATAAT 
GGCGGCGAAA AAGATGTCGA GCTGATAGAT AGGGTGGGTA ATAAATTTAA ACACGCTTCA 
ACACTAGAGC ATCTTTACTA CAACTTCTAC ATCCAAGGCA TCTCACGCGC ACTACTTCAA 
GAGCTAGCCC GCCACCGCAT AGCGAGCCTA AGCGTCAAAT CAACCCGCTA CACGCTAAAA 
GAGCTAAAAA AAGAGGAGAA ATTTGAAGTA GGGCAGTTTG AGCGTGCGGC TAAATTTATC 
GTGCTAACAA ATGACGAAAT GGTCGATAAC GCGAGTATAA AAGCGCTTGA AAACTTACGT 
GAAATTTTAG CTTCAACCAC AAAAAGCCTT GATATAGTCA AATACTGCTT GCCAGAGTGC 
TATAAAACCG AGCTTACATG GAGTATAAAT GCTAGAAGCT TGCAAAATTT CATCTCTCTA 
AGAAGCTCAA AGTCAGCCCT TTGGGAGATA AGAAATTTAG CAAATACTAT CTACAACGCC 
TTGCCAAATG AGCATAAATT TATCTTTGAG AAGTGCTTGC CAGAGGATGA GGGTTAA 

 

Protein sequence

MLKNFTKREN MQVTLLNHTP LNICSHAIRT CWQSFEKGDN GGEKDVELID RVGNKFKHAS 
TLEHLYYNFY IQGISRALLQ ELARHRIASL SVKSTRYTLK ELKKEEKFEV GQFERAAKFI 
VLTNDEMVDN ASIKALENLR EILASTTKSL DIVKYCLPEC YKTELTWSIN ARSLQNFISL 
RSSKSALWEI RNLANTIYNA LPNEHKFIFE KCLPEDEG