| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1808 |
|---|
| Symbol | lspA |
|---|
| ID | 5597160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 37700 |
|---|
| End bp | 38152 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640928643 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_001465965 |
|---|
| Protein GI | 157165011 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.154233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAA GCTTAGTTAG ATTTTTTATT GCGTTTTTTG TCATTTTTAT CGTTGATCAA
GCGATAAAAA TGATATTTAT AGATGGTTTT TCGTGGGAGG GCGAGTTTTT CTCGCTAGTT
CTTACATATA ATAAGGGCGT TGCATTTTCG ATGTTTGCCT TTTTAGATGA GTGGCTGAAA
TTTATCCAGA TAGCCCTCAT TTTAGGCGTT TTTGTCTATC TAGTCGTTGA GAAAAAACTG
CTTTGCTCGC ATGCCATTTG GCTTGGAGCT TTGCTAGGAG CTGGCAGCTC AAACATCACA
GATAGATTTA TCCATGGCGG CGTCGTGGAC TATGTCTTTT GGCACAAGTG GTTTAACTTT
GCGGTCTTTA ACTTCGCTGA TGTGATGATC GATCTTTGCG TCGTGATGAT ACTTTGGCAA
AGTTTTAGAA AAAGGAGAGA GAGTGGGAAA TAA
|
|---|
| Protein sequence | MRKSLVRFFI AFFVIFIVDQ AIKMIFIDGF SWEGEFFSLV LTYNKGVAFS MFAFLDEWLK
FIQIALILGV FVYLVVEKKL LCSHAIWLGA LLGAGSSNIT DRFIHGGVVD YVFWHKWFNF
AVFNFADVMI DLCVVMILWQ SFRKRRESGK
|
|---|
| |