Gene CCC13826_1805 details

Gene Information

• Locus tag: CCC13826_1805
• Symbol: prfA
• ID: 5597171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 39927
• End bp: 40994
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640928646
• Product: peptide chain release factor 1
• Protein accession: YP_001465968
• Protein GI: 157165147
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0117611
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGCTG ATAAACTTCA TCCATTTTTG GATCGCTATG ATGAAATTTC TACGCTTCTA 
AGCGATCCAA ATATAGCAAA CGATATCGAA AAGATGACAA AGCTCTCAAA AGAGCAATCA 
TCTATCGAAC CAGTCGCAAC TGCCGCAACA AAATATCTAC AAATTCTAAA CGACATCGAA 
GAGAATAAAG CCCTGCTTGA GGACGCTGAG CTTGGCGAAC TTGCAAAAGA AGAGCTTAAA 
AGTTTAGAAA TTTCAAGAGA GAAGCTTGAA GAAGAGATCA AAATTTTACT TCTTCCAAAA 
GATCCAAACG ATGATAAAAA TATATTTTTA GAGATCCGCG CAGGTACTGG CGGCGATGAA 
GCAGCACTAT TTGCTGGTGA TTTATTTAAC GCATACATTA GATACGCAGA GCTTCGTGGA 
TATAAATTTG AGATCGTTAG CCAAAGCGAG GGCAACACTG GCGGTTTTAA AGAGATCATC 
GTGCTTATAA AGGGCAAAGG CGCTTACTCA AGGCTAAAAT TTGAAGGTGG CACACATAGG 
GTTCAACGTG TGCCAGAGAC TGAGAGCCAG GGCAGGGTGC ATACTTCGGC TGTGACTGTG 
GCTATCATGC CAGAGGTTGA AGACAGCGAG ATCGAGATCA ATCCAAATGA TATAAGAGTT 
GATGTTATGA GAAGCTCAGG CCACGGCGGC CAATCGGTCA ATACAACCGA TAGTGCCGTT 
AGGATCACGC ACATACCAAC GGGTCTTGTT GTCACAAACC AAGATGGCAA GAGCCAGCAC 
AAAAACAAAG AAGCTGCGAT GAAGGTGCTA AAGGCTAGAC TTTACGAGAT GCAAGAGCAA 
GAGAGACTTG CTAAAGAGAC TAGCGAGCGC AAGAGTCAAG TCGGCACTGG AGACCGCTCA 
GGCAGGATAA GAACTTATAA CTACCCACAA AACCGCATAA GCGATCACCG AATAAATTTA 
ACACTTTACC GCCTTGATGC GATCATGGCT GCAGGATTAT TTGACGAGAT CATAGAGCCA 
CTTATCACTC ACTATCAAGC AGAAGCGATG CTTGAAGCTG GCATCTAA 

 

Protein sequence

MFADKLHPFL DRYDEISTLL SDPNIANDIE KMTKLSKEQS SIEPVATAAT KYLQILNDIE 
ENKALLEDAE LGELAKEELK SLEISREKLE EEIKILLLPK DPNDDKNIFL EIRAGTGGDE 
AALFAGDLFN AYIRYAELRG YKFEIVSQSE GNTGGFKEII VLIKGKGAYS RLKFEGGTHR 
VQRVPETESQ GRVHTSAVTV AIMPEVEDSE IEINPNDIRV DVMRSSGHGG QSVNTTDSAV 
RITHIPTGLV VTNQDGKSQH KNKEAAMKVL KARLYEMQEQ ERLAKETSER KSQVGTGDRS 
GRIRTYNYPQ NRISDHRINL TLYRLDAIMA AGLFDEIIEP LITHYQAEAM LEAGI