| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1763 |
|---|
| Symbol | rpsH |
|---|
| ID | 5597207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1893931 |
|---|
| End bp | 1894326 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640930436 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001467706 |
|---|
| Protein GI | 157164583 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00017341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACG ATTTAATATC AGATGGATTA ACACGCATTA GAAATGCAAG TATGAGAAGA
CTTGAGACTG CGAAATTGCT TCATTCTAAG GTTGTTGAGG CTACTCTTTC TATCCTTGCA
GCAAAAGGCT ATGTAGAGAG CTACAACGTT ATCGAAGAAG GTAACAAGAA ATTTATAAAC
GTAGTTTTAA AGTATGATGA GTACGGCAGA AGCGTTATAA ACGAGCTTAA AAGGGTTTCA
AAACCTGGTC GCCGTGTTTA TCAAGGCAAA GACGACATTA AGCGTTTTAA AAACGGTTAC
GGAACAGTTA TCGTTAGCAC AAGCAAAGGC GTTATGAGCG GTATTGAGGC AAGTAAAGCT
GGTGTTGGTG GCGAGGTTCT TTGCACCGTT TGGTAA
|
|---|
| Protein sequence | MLNDLISDGL TRIRNASMRR LETAKLLHSK VVEATLSILA AKGYVESYNV IEEGNKKFIN
VVLKYDEYGR SVINELKRVS KPGRRVYQGK DDIKRFKNGY GTVIVSTSKG VMSGIEASKA
GVGGEVLCTV W
|
|---|
| |