Gene CCC13826_1761 details

Gene Information

• Locus tag: CCC13826_1761
• Symbol: rplF
• ID: 5597653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: -
• Start bp: 1893197
• End bp: 1893733
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640930435
• Product: 50S ribosomal protein L6
• Protein accession: YP_001467705
• Protein GI: 157164254
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00139046
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TTGGAAAACA GCCTATCGCT ATCCCAAGTG GTGTAGACGT TAGCGTTGAA 
AATAATGTCC TAAAATTTAA AAAGGGCAAT CACTTAAAAG AGCTTGACAC AAAAGGTCAC 
GTTGATGTCA AGATAGAAAA TGGTCATATA GTTTTTGCTC CAAAGGGCGA AGATCGCCAA 
AGCAGAGCTT ACTGGGGAAC ATATAGAGCA CTTGCTAACA ACATCGTAAC TGGTATCACT 
CATGGCTTTA CTCGCCAGCT TGAGATCAAC GGCGTTGGTT ACAAAGCAGC TGCAAAAGGT 
AAAATTTTAG AGCTTTCTCT TGGTTTTTCA CACCTTATCA ACTATGAGCT ACCAGCAGGA 
GTTGAAGCTA GCGTTGATAA AAACGTTATT ACTATCAAAG GTGACGACAA ACAAGTGGTA 
GGTCAAGTGG CTGCTCAAGT TAGAGGATTT AGACCACCTG AGCCATATAA AGGCAAGGGC 
GTTAAATATC TAGAAGAACG TATCATCCGC AAAGCGGGCA AGACATCTAA GAAGTAA 

 

Protein sequence

MSRIGKQPIA IPSGVDVSVE NNVLKFKKGN HLKELDTKGH VDVKIENGHI VFAPKGEDRQ 
SRAYWGTYRA LANNIVTGIT HGFTRQLEIN GVGYKAAAKG KILELSLGFS HLINYELPAG 
VEASVDKNVI TIKGDDKQVV GQVAAQVRGF RPPEPYKGKG VKYLEERIIR KAGKTSKK