| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1757 |
|---|
| Symbol | secY |
|---|
| ID | 5596233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1890692 |
|---|
| End bp | 1891750 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640930431 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001467701 |
|---|
| Protein GI | 157165060 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.148623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACA TCACAGCTTC GATCATCATG GAGCTTCTAG CAGCGACATT TCCAAAGTTA
GGTCAGATGA AAAAAGAGCG CGACGGTATG CAAAAATATA TGCAAATCAT ACGTTATGCG
ACCATCGTTA TCACTCTTGT TCAATCAATC GGCGTTTCTA TCGGACTTCA AAGCTTGAGC
GGTCGTGGTG GCGAGCAGGC TATCATGATA GATATGAATT TATTTATCGC GATCTCTGCT
GTATCTATGC TAACTGGCAC TATGCTACTT ATGTGGATAG GTGAGCAGAT TACGCAGCGC
GGTATAGGCA ACGGTATAAG TCTTATCATC TTTGCGGGCA TCGTCTCTGG CATACCTAGT
GCGATCGGCG GAACTGTAAA TTTGGTAAAT ACTTCTGAGA TGAATTTCCT AACAGTCATC
GCTATTTTGG TGATCATTTT AGCGACTATT GGTGCTATTA TCTTTGTCGA GATGGGCGAA
AGACGTATTC CCATTTCTTA CTCAAGAAAA GTGATAATGG AAAATCAAAA CAAACGTATA
ATGAACTATA TACCGATCAA AGTAAATTTA AGTGGCGTTA TCCCACCGAT ATTTGCTAGT
GCGATTTTGA TGTTTCCAAG CACTATTTTG CAGGCTAGCA CAAATCCGGT AATCCAAGCT
ATCAACGACT TTTTAAGTCC AAATGGCTAT ATGTTTAACG TTTTGACATT TTTATTTATC
ATCTTTTTTG CGTTTTTCTA CGCATCTATC GTGTTTAACA CAAAAGATAT AAGTGAAAAT
TTAAAGAAAC AAGGTGGATT TATCCCAGGT GTTAGACCAG GTGAGAGCAC AGCTAGCTAT
CTAAATGAAG TAGCTGGCAG GCTAACTTTA GGTGGAGCTT TGTACTTGGG TATCATTTCA
ACATTACCTT GGGTACTTGT AAAGACTATG GGCGTACCAT TTTATTTTGG TGGTACATCA
GTTCTTATCG TGGTTTCAGT AGCACTTGAT ACGATGAGAC GTATAGAGGC TCAGTCTTAT
ACAAATAAAT ACCAAACTCT AAGTGCAGTA GGTCTGTAA
|
|---|
| Protein sequence | MPYITASIIM ELLAATFPKL GQMKKERDGM QKYMQIIRYA TIVITLVQSI GVSIGLQSLS
GRGGEQAIMI DMNLFIAISA VSMLTGTMLL MWIGEQITQR GIGNGISLII FAGIVSGIPS
AIGGTVNLVN TSEMNFLTVI AILVIILATI GAIIFVEMGE RRIPISYSRK VIMENQNKRI
MNYIPIKVNL SGVIPPIFAS AILMFPSTIL QASTNPVIQA INDFLSPNGY MFNVLTFLFI
IFFAFFYASI VFNTKDISEN LKKQGGFIPG VRPGESTASY LNEVAGRLTL GGALYLGIIS
TLPWVLVKTM GVPFYFGGTS VLIVVSVALD TMRRIEAQSY TNKYQTLSAV GL
|
|---|
| |