Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1752 |
Symbol | rpsD |
ID | 5596182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1887939 |
End bp | 1888565 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640930426 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001467696 |
Protein GI | 157164972 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000068654 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGAT ATACAGGACC TGTTGAAAAA TTAGAAAGAC GTCTTGGTGT GTCTCTTGCG TTAAAAGGCG AAAGAAGACT TGCTGGTAAA AGTGCTTTAG AAAAAAGACC TTATGCGCCA GGACAACATG GACAAAGAAG AGCAAAAATA AGCGAATATG GCTTACAACT TCGCGAGAAG CAAAAAGCTA AATTTATGTA TGGTGTTTCA GAGAAACAAT TTAGAAGATT GTTCCAAGAA GCAGCACGCC GCGAGGGCAA CACTGGTGCT CTTTTGGTTC AACTACTAGA GCAGAGATTA GACAATGTTG TTTACAGAAT GGGCTTTGCA ACGACTCGTC GTTTTGCTCG CCAGCTTGTA ACTCACGGAC ATATTTTAGT AAATGGCAAG AGAGTGGATA TCCCATCTTA CAGAGTGGAG CCAGGCTCTA AAGTAGAAGT TGCTGAGAAA TCTAAAAACA ATCCACAAAT CGTTCGCGCG ATCGATCTTA CAGCTCAAAC TGGCATCGTT GCTTGGGTAG ATGTGGAAAA AGAGAAAAAA TTTGGAATTT TCACTAGAAA TCCAGAAAGA GAAGAGGTTA TCATTCCTGT TGAGGAAAGA TTTATAGTAG AGCTTTACTC AAAATAA
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Protein sequence | MARYTGPVEK LERRLGVSLA LKGERRLAGK SALEKRPYAP GQHGQRRAKI SEYGLQLREK QKAKFMYGVS EKQFRRLFQE AARREGNTGA LLVQLLEQRL DNVVYRMGFA TTRRFARQLV THGHILVNGK RVDIPSYRVE PGSKVEVAEK SKNNPQIVRA IDLTAQTGIV AWVDVEKEKK FGIFTRNPER EEVIIPVEER FIVELYSK
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