| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1739 |
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| Symbol | panD |
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| ID | 5595660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1878934 |
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| End bp | 1879281 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640930414 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_001467684 |
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| Protein GI | 157165611 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00356963 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATAG AAATTTTAGC TAGTAAGATC CACAGAGCCG TCGTAACAGA CGCAAATTTA
AACTATGTTG GCTCGATCAG CATCGGTGAG GAGCTTATAA AGGCTGCAAA TTTGATAGAA
AATCAAAAGG TTGAAATTTT AGACATAAAT AACGGCGAGA GATTTGCCAC CTACGTGATA
AAGGGCAAAA AAGGCGAAAT TTGTCTAAAC GGCGCAGCTG CTAGAAAGGT CTGCGTTGGC
GACGTGGTCA TCATCGTGGC TTATGCTAGT ATGAAATTTA AAAAGGCTAA GAAATTTAAG
CCAACCATCG TGCATGTAAA TAACAAAAAC GAGATCATAA AGGAGTAG
|
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| Protein sequence | MNIEILASKI HRAVVTDANL NYVGSISIGE ELIKAANLIE NQKVEILDIN NGERFATYVI
KGKKGEICLN GAAARKVCVG DVVIIVAYAS MKFKKAKKFK PTIVHVNNKN EIIKE
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