| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1709 |
|---|
| Symbol | |
|---|
| ID | 5596468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1852141 |
|---|
| End bp | 1853109 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640930387 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001467658 |
|---|
| Protein GI | 157164675 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1133] ABC-type long-chain fatty acid transport system, fused permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCAT CATTTTTTAA AGACAAAAAA TGGGCGCTTT GGGCTTACGG CGGAGCGATA
TTTATCATCT TGCTACTTGT CTATCAAACG CATCTAAACG TCCGCATCAA CGAGTGGTAT
AAAAATTTCT ACGACATCGT GCAAAACTCA AAGGATCACA AAGTAGATGA GTTTTGGCGC
GAGATATTAA ATTTCATAAA GATCGCCATG CCTTACGTCG TGACCTACAC GGTGATATCG
TTTTTTGCGA GCCACTGGGT CTTTCGCTGG AGGGAGGCGA TGACCTTTAA ATACCTCAAA
TTTTGGAGAA ACTGCCAAAA CGACATCGAG GGCAGCTCGC AGCGTATCCA AGAGGATGTT
TATCGCTTTG CTAAGATCAT GGAGAGCCTT GGCGTGCAGG TTTTAAAGGC ATTTATGACG
CTGATTGCCT TTATACCGGT GCTTTGGGAG CTAAGCAAAA GCGTGAGCCT GCCTTTCATC
AAGGACATCG AGGGCTCGCT AGTTTATATC GCGCTACTAA TTAGCATCGG AGGCCTCATC
GTATCGTGGT TTGTGGGCAT AAAGCTACCG CACCTTGAGT ATAACAACCA AAAAGCGGAG
GCGGCGTTTA GAAAAGAGCT GGTTTATGGC GAGGATGATA AGCTTAAATT TTGCCAGCCA
AACGTCATGC TAGAGCTTTT TACAGGAGTG AAGCTAAACT ACTACAAGCT ATTTTTGCAC
TACGGCTACT TTAATCTCTG GCTCATCTCG TTTTCGCAAA TTCTTGTCAT CGTGCCTTAT
ATCATCATGG GTAATGGCCT ATTTAGCGGC GTCATCACGC TTGGCGTTTT GATCCAAGCT
AGCAATGCTT TCTCTCAGGT CAGAGAGAGC TTTAGCGTCT TTATCGATAA CTGGACGACG
ATAACGGAGC TAAGATCGGT CAATAAACGT TTGAGAGAAT TTGAGAGAAA TATAGACTAC
AAGGCGTAG
|
|---|
| Protein sequence | MFSSFFKDKK WALWAYGGAI FIILLLVYQT HLNVRINEWY KNFYDIVQNS KDHKVDEFWR
EILNFIKIAM PYVVTYTVIS FFASHWVFRW REAMTFKYLK FWRNCQNDIE GSSQRIQEDV
YRFAKIMESL GVQVLKAFMT LIAFIPVLWE LSKSVSLPFI KDIEGSLVYI ALLISIGGLI
VSWFVGIKLP HLEYNNQKAE AAFRKELVYG EDDKLKFCQP NVMLELFTGV KLNYYKLFLH
YGYFNLWLIS FSQILVIVPY IIMGNGLFSG VITLGVLIQA SNAFSQVRES FSVFIDNWTT
ITELRSVNKR LREFERNIDY KA
|
|---|
| |