Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1702 |
Symbol | |
ID | 5596640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1846144 |
End bp | 1846707 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640930381 |
Product | LemA protein |
Protein accession | YP_001467652 |
Protein GI | 157165571 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.159811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTCGT TAGTCATCGT GATACTTGTT GTCGCAGTCA TTTTTGTCTT TTTCATTAGC CTTTACAACT CGCTTGTTGC AAAGCAAAAC CAGGTAAAAA GCGTGGAGGC TGGCATCGAC GCACAGCTAA AAAGAAGATA TGACCTCATA CCAAATTTAG TAGCTACTGC AAAAGAGTAC ATGGTGCATG AAAAGAGCCT ACTAGAAAAC ATCACTGCCC TTAGAGAAAG TGCTAGAAGC GCATCAACAA ATGAGGAGAA ATTTGAGCTA AATAACAAAA TTTCAAGTTT GCTAAATGGT CTTAGAGTAA GCGTAGAAAA CTATCCTGAT CTAAAAGCAA ATCAAAATTT ACTTCACATC CAAAGCACAC TAAACGAGGT CGAAGAGCAA ATTTCAGCTG CCAGACGTGC TTACAACTCA GCTGTTGAAA TTTACAACAA CGCCACACAG ATGTTTCCTT CAAACATCGT AGCTTCAATG TTTGGCTTTC ACAAAGATGT GTTTTTTGAC ATCCCTGAAA ATGAAGCAGT TGCTCCAAAC GTCGGTGATC TTTTTAAAAA ATAA
|
Protein sequence | MNSLVIVILV VAVIFVFFIS LYNSLVAKQN QVKSVEAGID AQLKRRYDLI PNLVATAKEY MVHEKSLLEN ITALRESARS ASTNEEKFEL NNKISSLLNG LRVSVENYPD LKANQNLLHI QSTLNEVEEQ ISAARRAYNS AVEIYNNATQ MFPSNIVASM FGFHKDVFFD IPENEAVAPN VGDLFKK
|
| |