| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1655 |
|---|
| Symbol | |
|---|
| ID | 5597186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 179001 |
|---|
| End bp | 180635 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640928785 |
|---|
| Product | ABC transporter ATP-binding protein YojI |
|---|
| Protein accession | YP_001466101 |
|---|
| Protein GI | 157164526 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTAA ATTTAATAAA AAGCAATCTT TTTTCAATAA TCAAAATAGT GATCCTGACG
CTCGCCTTTA GCGGGCTTGG CGTCTGGACG CTCTCTTTTA TCAACAACGA ACTTGTAAAT
TTAAAAGAAT TTGACGCCTT TGTGGCGGTT AAATTTATAG TTGTTTTGCT CCTCTTTTTT
CTAAGCGCCA TCGCTGCAAA CATCTCACTT ACAAATTTCG GACATAAATT TATCTACGAG
CTTAGATATC AAAGCGTAAA GCAAATTTTA GACACGCCAA ATAGCGTGAT AAACGAAATC
GGCAAGGCAA AGATCATAGC AAGTCTAAAC AACGACATAA AAACGATCAC ATTTGCCTTT
ATGAGCGCTA CTGGCTTCAT ACAAAGCCTA GTTTTCATCA TCTGCGCTAG CATCTATCTT
TGCGTGATCG CGCCAAAAGT TTTTATATTT CTAGCCGTTT GGATCGGTGC GACGCTTTTT
ATAAACACGT TTTTGATGAA AAAGATCCAC TTTTACTTTA AAGACTCAAG GACGCAAGAT
GACGCGCTTC AAAGGCACTA TGATGACATC GTTGAGGGTC ATAGAGAGCT TAGTCTAAAC
AGAGCAAGAG CGCAAATTTG CTTTGATGAG CTAAATTTGA CAGGCGACAA GAAGCGCCAA
AGCATGGTAA AAGCTGACGT ATTTCACGCA CTAAGTGATA ATTTCACAAA CGTGATGCTC
CTTGGCTCAG TCGGACTTTG TGTATTTTTA TGCGTGGCAT TTGACTGGGC AAGCCTGCAA
ACAGCACTTA GTATAAGCCT TACGATACTA TTTTTAAGAG GCTCATTTAT GAGTATGGTT
GGCTCCATAC CAGCCGCACT TAGCGCAAAG GTGAGCTTAG AAAAGATCAT GAGTTTAAAT
TTAAATGAAT TTAAAGAAGG CTTTAAATTT GATGATAGCC TAAGCGATGA GTGGCAAAGC
ATCAGGCTAA AGGGTGTAAA TTTCAACTAC GACCACGGCA AATTTAGCCT AAAAGATGTA
AATTTAGAGA TCAAACGCGG TGAGATAACA TTTATCATCG GTAAAAATGG TAGCGGCAAA
AGCACGCTTA TAAACATTCT TTGCGGACTT ATCCGCCCAA GCAGCGGCGA AATTTACCTT
GATAGCACAA AGATAGATGA TGCAAATTTA CAAAGCTATC AAGCAAAGAT AAGCGCTATT
TTTGCTGACT TTTATCTATT TTCGCAAACG CTATCTCGTG ATGGCTTTGC CAGCCAAAGC
GATATAGAGG AGCTTTTAGC CCTGCTTGAG ATAGATAAAA AGGTAAGTGT CGTTGATAAT
AAACTTAGCA CCACGCAGCT CTCAACTGGC CAGAGAAAGC GACTAAGCCT GCTAATAGCC
ATATTAGAAC GCCGCTCTAT CCTTATCCTT GATGAGTGGG CGGCCGATCA AGATCCGTTA
TTTAAGCGTA AATTTTATAA AGAAATTTTG CCATTTTTGC AAAGCAAAGG CATAAGCGTC
ATCGCTGTAA GCCACGATGA TAGCTACTTT GACGTGGCAA CTAGGATCAT TTTAGTAAAA
GATGGTTTTG TGCGTGAGCT TGATGAGGCT GAGCGCATAA GTGCTGCAAA AGACGCCGTG
GAAAAGATAA AATAA
|
|---|
| Protein sequence | MLVNLIKSNL FSIIKIVILT LAFSGLGVWT LSFINNELVN LKEFDAFVAV KFIVVLLLFF
LSAIAANISL TNFGHKFIYE LRYQSVKQIL DTPNSVINEI GKAKIIASLN NDIKTITFAF
MSATGFIQSL VFIICASIYL CVIAPKVFIF LAVWIGATLF INTFLMKKIH FYFKDSRTQD
DALQRHYDDI VEGHRELSLN RARAQICFDE LNLTGDKKRQ SMVKADVFHA LSDNFTNVML
LGSVGLCVFL CVAFDWASLQ TALSISLTIL FLRGSFMSMV GSIPAALSAK VSLEKIMSLN
LNEFKEGFKF DDSLSDEWQS IRLKGVNFNY DHGKFSLKDV NLEIKRGEIT FIIGKNGSGK
STLINILCGL IRPSSGEIYL DSTKIDDANL QSYQAKISAI FADFYLFSQT LSRDGFASQS
DIEELLALLE IDKKVSVVDN KLSTTQLSTG QRKRLSLLIA ILERRSILIL DEWAADQDPL
FKRKFYKEIL PFLQSKGISV IAVSHDDSYF DVATRIILVK DGFVRELDEA ERISAAKDAV
EKIK
|
|---|
| |