| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1638 |
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| Symbol | |
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| ID | 5597497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 159727 |
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| End bp | 161109 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640928770 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001466086 |
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| Protein GI | 157165073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.240044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AGGCGTTTAT ACTTATAACA GCGGCGTTTT TGGCTGGTTG CTCGTTTCGC
CCAGATATGC CAAATGTGGA TACAAATTTT ACCTCAACAT ACACTTTCGA GACAAGCGAT
ATAAGAGATC TTTGGTGGAA GGAATTTAAA GATGAAAATT TAAATATTCT TGTTGAAAGT
GCGCTTGAGA AAAATACAAA TTTACGCATC GCATATTTAA ATTTAGAGAA GGCAAAGGCG
AGCCTTGGCG TTGCTGAGGC TAGCTTGCTC CCTGGGGTAA ATTTAAATGT AAGTTATACC
AAAGCAAAAA CCAGCGGTGA AACTTACACT GGGCAGCCTC AAACACGCTA TAGAAGCTCT
AGCATAAATT TAGGGCTAAA CTATGAGATA GATCTTTGGG GTAGAGTAAG AAATAGCGTG
CTTGCAGCTA ATGAAAATTT AAATGCGAGC AAATTTGACT ATGATAGCGC CAGACTAAGC
CTTAGCTCAA GTGTGGCAAA AAGCTACTTT GCTCTAGTGT CACTAAACAT GCAAGAAGCG
GTGCTAAAAG AGACACTAAA AACCTATGAG GACACGCTGG CACTTCGAAA GACGCAGCTT
GATCTTGGTG GCATAAATGA GATGACCTAT CTACAAAGCA AAGCTGAGGT TGAAAGGGCA
AAAACTAGCC TAACTTCAGT GCTAAACTCA AAGTCGCAAG CGCTTACTTC GCTAGCCATC
CTAACTGGCA AGAGCAATGA TGAAATTTTA AAAGGAGCCG TTGCTAGTGC GCAAAATTTA
CCAAGCTCGC CTGAGATAAA GGCTGGCATC AGCTCAGATG TTTTGCTTAG AAGAAGTGAC
GTGGCAAAGG CGCTAGCAGA TCTAAAAGCT ACAAATGCCC TTGTGGGCGT AGCAAAGGCT
GATTATTTCC CTACGATCTC ACTCACTGGA CTTTTGGGCT TTACAAGTAT TGATTTTGAA
AATATATTTG TAGGAAATGC CAATACTTGG AACATAGGTG GCTCTTTAGC TCAAAAGATA
TTTGACTATG GCAGGACAAA AAACAATGTC CGAGTTGCTG AGACAAACGA GCAAATCGCG
GCCGTCACTT ACGAAGCGAC TGTTAGATCA GCCCTTGGTG AGGTTAGAGA TGCCCTTATA
TCAAGGCAAA ACGCAAAGCT CTCTTTGGAT CAGGTGAAAA ATTTGCTACA ATCGCAGCAA
AAAATTTATT CGCTTGCTAA AGATCAGTAT AACGCTGGCT ATATTGGTCA CTTAGAGCTT
CTTGATGCAC AGAGAAATTT GCTTCAAGCA AAGCTTCAAG ATATCTCAGC TAAGCTTGAT
GAGGTAGATA GCGCGGTCGA AGTTTATAGA GCACTTGGCG GCGGATTTAA GGTAGATAAA
TAA
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| Protein sequence | MKNKAFILIT AAFLAGCSFR PDMPNVDTNF TSTYTFETSD IRDLWWKEFK DENLNILVES
ALEKNTNLRI AYLNLEKAKA SLGVAEASLL PGVNLNVSYT KAKTSGETYT GQPQTRYRSS
SINLGLNYEI DLWGRVRNSV LAANENLNAS KFDYDSARLS LSSSVAKSYF ALVSLNMQEA
VLKETLKTYE DTLALRKTQL DLGGINEMTY LQSKAEVERA KTSLTSVLNS KSQALTSLAI
LTGKSNDEIL KGAVASAQNL PSSPEIKAGI SSDVLLRRSD VAKALADLKA TNALVGVAKA
DYFPTISLTG LLGFTSIDFE NIFVGNANTW NIGGSLAQKI FDYGRTKNNV RVAETNEQIA
AVTYEATVRS ALGEVRDALI SRQNAKLSLD QVKNLLQSQQ KIYSLAKDQY NAGYIGHLEL
LDAQRNLLQA KLQDISAKLD EVDSAVEVYR ALGGGFKVDK
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