Gene CCC13826_1610 details

Gene Information

• Locus tag: CCC13826_1610
• ID: 5597049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 771229
• End bp: 773169
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640929339
• Product: hypothetical protein
• Protein accession: YP_001466635
• Protein GI: 157164537
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1292] Choline-glycine betaine transporter
• TIGRFAM ID: [TIGR00842] choline/carnitine/betaine transport

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00096761
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAT TTCAAAGGTC AAAATTTAAT AATTCAGTAT TTATCCCATC GCTTATTGTC 
ATATTTTTAA TAGCGGCATT TGCAGCGATA TTTCCAAATT TCTCAAATGA GTTTTTTAAA 
GGTATGCAAA ACTACATCGC GGCCAAATTT GGCTGGTTTT ACATCCTGGT CGTCGCCGTC 
ATACTGCTAA GCGTCATCAT TCTTGGCTTT AGTAAGCTTG GCGAGATCAA ACTAGGAGCC 
GATCACGTAA AGCCAGAGCA CAAAAATATC TCGTGGTTTT CTATGCTTTT TGCTGCTGGC 
ATGGGCATAG GTCTAGTGTT TTTTGGTGTG GCCGAGCCGC TCATGCACTA TCTAAACCCA 
CCAGTTGGCG ACGCACAAAC TATCGCAGCG CAAAAGCTTG CGTTGAATAT CACATTTTTT 
CACTGGGGCA TGGGCGCATG GTCGGTCTAT GCTATCGTAG CGCTAATTCT AGCCTTTTTC 
TCGTATAGGC ACGGCTTGCC ACTCACGCTT AGATCGGCAT TTTATCCGAT CATCGGAGAT 
AAAATTTACG GCAAGATAGG TAGCGCCATC GATACATTTG CCGTCGTAGC GACCCTTTTT 
GGTGTGGCGA CCTCGCTGGG ATACGGCGTG CTGCAGGTAA ATGCTGGCCT TACGCACGTT 
TTTGGGCTGC CGACCATGCA CATCACGCTT CTAATAGTGC TTTGTTTTGC AGCTACCATC 
TCAGCGGCAA GCGGCGTGGA TAAGGGCATC AAGATCTTAT CAAACGCAAA CATCGCACTA 
GCTATATGTT TTATGTTTTT GATACTATTT TTGGGCGATA CTACGCAGCT TCTAAAGTCG 
TTTGTGCAAA ACAGCGGTGA CTACGTCTCT ACGCTCATCT CAAACACTTT TAACCTCTAC 
GCCTACGAGA GGCAAAACGA GAGCTGGCTT GGCGGTTGGA CGCTGCTATA CTGGGCTTGG 
TGGCTATCTT GGTCGCCGTT TGTGGGGCTT TTTATAGCTA AAATTTCAAA GGGCAGAACG 
ATAAGAGAAT TTGTGATAGG CGTGCTTTTA GTGCCAACTG GCTTTACCTT TGCTTGGATG 
AGCTTTTTTG GTAACTCGGC GATCGCTTTG GTGCAAAGTG GCTTTAGTGA GCTAGCGACC 
ACGGTAAATT CTGACTCAGC CTCAGCGCTA TTTATGTTTT TGGAGAAATT TAGCTTCTCA 
GGCGTGCTAA GCGTGATTGC AGTCTTTATG ATCGTCATAT TTTTCGTAAC TTCTGCCGAC 
TCTGCGGCGA TCGTTATGAA CATGCTTTGC TCAAACGGCA AGGATGATAC ACCAGTTTGG 
CAAAAGGTCT TTTGGGGCGT TACAGTGGGC GTCGTGGCGG CATTTTTGAT GCTAGCTGGT 
GGTCTTGGCT CGCTTCAAGC ACTTACGATC ACGACAGCAC TGCCATTTTC CATAGTGCTA 
CTTGGCGCCA TTTATGGGCT ATTTAAGGCG TTACGTGTGG ATCTAACCAA AAAAGAGACA 
AATAACTTTA GTAACATGCC TATTAGTGAT CTTTCAAAGC CGTGGCAAGA ACGTCTAAGT 
GCGATCATCA CGCTGCCAGG CAAGAAAGAT GGCAAGAAAT TTTTAAACGA GGTTGCACTA 
AAAGCTTTTA ACGAGCTAAA AGAGGAATTT GCCAAAAACG GACTTGAAGC AAAGGTCACA 
AATGGCGAGA ATTTTGTAAA TTTAAATGTC GGACTTGGCG ACGAGATGGA CTTTAGATAT 
GGCGTCTATC TCACCAAGAG CCATAGTCCA GACTACACCA GAGAGCTTGA CGGCGATGAT 
CTTTACTATA GAGCTGAGGT CTATCTAAAA GAGGGCGGTC AGGACTACGA TGTGCTTGGC 
TGGAGCGAAG CTACGCTGAT AAATGACGTC ATCGAGCAAT ACCGCAAACA TATGCAGTTT 
TTGCACGTTG TGAGAAGGTA A 

 

Protein sequence

MFKFQRSKFN NSVFIPSLIV IFLIAAFAAI FPNFSNEFFK GMQNYIAAKF GWFYILVVAV 
ILLSVIILGF SKLGEIKLGA DHVKPEHKNI SWFSMLFAAG MGIGLVFFGV AEPLMHYLNP 
PVGDAQTIAA QKLALNITFF HWGMGAWSVY AIVALILAFF SYRHGLPLTL RSAFYPIIGD 
KIYGKIGSAI DTFAVVATLF GVATSLGYGV LQVNAGLTHV FGLPTMHITL LIVLCFAATI 
SAASGVDKGI KILSNANIAL AICFMFLILF LGDTTQLLKS FVQNSGDYVS TLISNTFNLY 
AYERQNESWL GGWTLLYWAW WLSWSPFVGL FIAKISKGRT IREFVIGVLL VPTGFTFAWM 
SFFGNSAIAL VQSGFSELAT TVNSDSASAL FMFLEKFSFS GVLSVIAVFM IVIFFVTSAD 
SAAIVMNMLC SNGKDDTPVW QKVFWGVTVG VVAAFLMLAG GLGSLQALTI TTALPFSIVL 
LGAIYGLFKA LRVDLTKKET NNFSNMPISD LSKPWQERLS AIITLPGKKD GKKFLNEVAL 
KAFNELKEEF AKNGLEAKVT NGENFVNLNV GLGDEMDFRY GVYLTKSHSP DYTRELDGDD 
LYYRAEVYLK EGGQDYDVLG WSEATLINDV IEQYRKHMQF LHVVRR