| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1567 |
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| Symbol | rpsA |
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| ID | 5595678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 552733 |
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| End bp | 554409 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640929131 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001466439 |
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| Protein GI | 157164057 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1
[TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.449646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTGA ACAAAAGTGT TCAATTAGGA AAAGCAAAAG ACGAAGATAT CGAAGATATC
GATTTTGCTG CGATGTTAGA GGAGTCTTTT AAAAAGACTG AAGAAGATAG TGACGCAAAG
ATCGTCAGTA TCAATGGTGA TGAGGTTTTA ATCGACGTTG GCAAGAAGTC AGAAGGCATT
TTAAATGTTT CTGAGATCAC TGACGCAAAC GGCAACCTGA CGCATAAAGT TGGCGATACG
ATCAAAGTTG TAATAACTGG ATCAAGAAAT GGAAGACCTA TAGTGTCGCA CAAAAAAGCA
CTTAGAAAAG AGAAAGTTAA AGCTTTCATC GAAGCTTACG ATCCTGAAAA TTCTGGCGAA
ATCGACGTAA AAGTAGTTGG AAAAAATAAA GGTGGTTTTA TCACTCAAGA CGCAAATGGC
GTAGAATTTT TCTTACCAAG AACGCACAGC GGATTTAAAA ACGCTGAGGG CGTAGTTGGA
AAATCATACA AAGTAAGAGT TATAAAAGTT GATAAAGAAG AGAACAGCAT CGTTGTTTCA
AGAAAGAAAA TTTTAGATGA CGACCGCAAA AAACGCAAAG AAGCCCTATC AAGCATAGTA
GAAAACGATA GTGTTATAGA GGGCACAGTT AAGAAAATCA CAACTTATGG TATGTTTGTT
GATGTTGGCG GTGTAGATGG ACTTGTGCAT TACAGCGAGA TAAGCTACAA AGGCCCAGTA
AATCCTAGCT CTTTATACAA AGAAGGCGAT AAAGTTTTAG TTAAAGTTAT CAGCTATGAC
AACGAAAAAC GCCACCTATC TCTATCTATC AAGGCTGCTA CTCCAGATCC TTGGGAAGAG
ATCATAAATG ATGGTCTAGA AGTTGGTGAC ACTATCAAAG TAACAGTTAG CAATATCGAG
CCTTATGGCG CATTTGTCGA TCTTGGAAAT GATATTGAAG GATTTTTACA CATATCTGAA
ATTTCATGGG ATAAAAATAT CAAAAATCCA AAAGATCACA TCAGCGAAGG TCAAGAGATT
GATGTTGAGG TTATCGAAAT AGACGCAAAA GGACACCGCT TAAGAGTGAG CCTTAAAAAT
TTACTTCCAA AGCCATTTGA TGAATTTAAA GCTAAATTTA AAGAGGGCGA CGTAGTAAAA
GGCGTTGTGA CAACTATCAC AAATTTTGGT GCATTTGTTA GAGTAGGCTG CGTTGAGGGC
TTGCTACACA ACGAAGATGC ATCTTGGGAT AGAAATGACA AGTGCAAAGA TATGTTTAAG
GCTGGCGATG AGCTAGAAGT AAAGATCATC AAAATCGACA GCGCTGAGCA AAAAATTTCT
CTAAGTCTAA AAGATCTAAA ACAAAGTCCA GTTCAAGCAT TTGCTAATAA ATTTAGTGTA
GGCGACATCG TAAAAGGAAC GATCCGTGAC ATTAAAGACT TCGGCGTATT TGTCGAGCTT
GGCGATAATG TTGATGCGTT AATTCGCAAA GAAGATCTAG GCAGCGTAGA TGCTAGCACG
TTAAAGATCG GCGATGAGAT CGAAGCTGCT ATCGCATTTA TTGATGAGAA GAAAAATAGA
ATTCGCCTAA GCATACGCCG TTTAGCAAAA CAAAAAGAGC GTGAAGTGTT AAATGAGATC
AACGACAACG ACGACAAAGT AACACTTGGC GACATCATAA AAGAACAATT ACGCTAG
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| Protein sequence | MAVNKSVQLG KAKDEDIEDI DFAAMLEESF KKTEEDSDAK IVSINGDEVL IDVGKKSEGI
LNVSEITDAN GNLTHKVGDT IKVVITGSRN GRPIVSHKKA LRKEKVKAFI EAYDPENSGE
IDVKVVGKNK GGFITQDANG VEFFLPRTHS GFKNAEGVVG KSYKVRVIKV DKEENSIVVS
RKKILDDDRK KRKEALSSIV ENDSVIEGTV KKITTYGMFV DVGGVDGLVH YSEISYKGPV
NPSSLYKEGD KVLVKVISYD NEKRHLSLSI KAATPDPWEE IINDGLEVGD TIKVTVSNIE
PYGAFVDLGN DIEGFLHISE ISWDKNIKNP KDHISEGQEI DVEVIEIDAK GHRLRVSLKN
LLPKPFDEFK AKFKEGDVVK GVVTTITNFG AFVRVGCVEG LLHNEDASWD RNDKCKDMFK
AGDELEVKII KIDSAEQKIS LSLKDLKQSP VQAFANKFSV GDIVKGTIRD IKDFGVFVEL
GDNVDALIRK EDLGSVDAST LKIGDEIEAA IAFIDEKKNR IRLSIRRLAK QKEREVLNEI
NDNDDKVTLG DIIKEQLR
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