Gene CCC13826_1549 details

Gene Information

• Locus tag: CCC13826_1549
• Symbol: mscL
• ID: 5596578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 531845
• End bp: 532252
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640929117
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001466425
• Protein GI: 157164769
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.406526
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTA TAAGCGAATT TAAAGAATTT GCGATGCGCG GAAATGTCAT AGATATGGCA 
GTTGGTGTTG TTATCGGTGG AGCATTTGGA AAGATTGTCT CATCACTAGT CGGTGATATT 
ATCATGCCAG TGGTTGGCGT TGTAACAGGC GGTGTAAATT TCACTGATCT TAAGCTAACA 
CTAAAAGAAG CAGCAGAAGG TGCGCCAGCT GTTACGATAA ACTATGGCTC ATTTATACAA 
ACAATGGTTG ATTTTTTAAT CATTGCATTT TGTATTTTTT GCGTTATCAA AGCTTTAAAT 
ACACTTAAAA ATAAATTACC AAAAGAAGAA GAGGCAGCTC CTGCAGAGCC TGAAATTCCA 
GCTGATATAG CACTTCTAAC TGAGATCAGA GATCTTCTTA AAAAATAA 

 

Protein sequence

MSFISEFKEF AMRGNVIDMA VGVVIGGAFG KIVSSLVGDI IMPVVGVVTG GVNFTDLKLT 
LKEAAEGAPA VTINYGSFIQ TMVDFLIIAF CIFCVIKALN TLKNKLPKEE EAAPAEPEIP 
ADIALLTEIR DLLKK