| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1546 |
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| Symbol | |
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| ID | 5595980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 528485 |
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| End bp | 530122 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640929114 |
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| Product | transglycosylase SLT domain-containing protein |
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| Protein accession | YP_001466422 |
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| Protein GI | 157164449 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.145291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTTTGC TGCGTCTCTT TAGTATCATC TCTCTGGCCT GCGTTGCTCT TTTGGCTAAA
ATTTACACCT ACGAGGAGCT AAAAAACGAG CCAAAAAGCC TTGCAAAAGA CTACTATATA
AACCGCCTTA TAAACGAGGG CAGCTACACA AAAGAGCAGA TAGCTGAGCT TTCACGCGAC
GTTTTTAGAA AAAGTGGCTT AGTTCAAAAA TCAATCAACA AAATTTTACC TCCAAAAGCA
GCTCCTAGCA AATGCCCTGG CATAAGCGCA AGCAACATCA CAAGTGCTAG TTTGGCTTGC
CAAAATTTAC TAACAACGAT GAGCTTTTCT CTAAAACTTG ATAGTAAAAC TCGTGAAATT
TTAGCGGCAA ATCTTGCAAA TACAAACCCA GAAAAAGCTA GGATTTTACG CACTTTAAAC
GAGCCAAACC CAGCTCTTAG CTTTGCAAAT GCTAACGATA TAAAGAGCTT TTTGGAGCTT
TTTAACGCTT CAAACCCGCA AAGTAAAAGT GCTCTTTTTA GCGTAAATTT TGAAGCAAAT
TTTATGAATA AGCTCTACAT GCAAAAAGGC TTTACAAATT TACTAAATGA CGTCGTATTT
AATAAAAAAT ATGAAAGCTT TAGAAGAAAT TTACTTAGCA TAGACCCAGC TGTAACTGAA
AAAAGCGACG CATTTACACT TGGGCTAAAC GCCATCTTGC TTGGTCAAAA TGACGTTGCA
TTTAGTTTTT TCACAAGAGC TAAAAATACC TTTGATAGGG CTTGGCAAAG AGACAATGCC
ACATTTTGGC AGTATGAACT AAGCGGCGAT CAGAGCTTTT TAAAAGAGCT AAGTGCTAGC
AAAGATGCAA ATATCTACTC ACTTTACGCA AGAGATTTGG TCGGTGGTGA GCCACTTGAG
GTGATCGTGC CAAGACCTAG CAAGCAAAAT ATCGAAAATT TTGATGTGAG CGATCCATTT
TTATGGAACA AAACCACGTC CCTTGCAAAA GATATGAACG CCACGCAAGC AAGCGAATTT
GCTATGAAAT TTTACACAAA CGAGAGCATC GGCGCATACG CATACTTTAT GCAAAAGGCG
CATGGCTGGG AGAAGCAGTA CTTTTTGATG CCAAACTCAC CAGAGCTTGA GGACATCAGC
ACTGAGCGAA AGTCGATGAT CTACGCACTA GCAAGGCAAG AGAGCCTCTT TATCCCAAGC
GTCGTTTCTA CCTCTTACGC CCTTGGCATG ATGCAGTTTA TGCCATTTCT TGCAAATGCG
ATCGGCAAAA AAGAGCTAAA AATTCCAAAT TTTGACCAAG ACGATCTTTT TAAAACAGAT
GTTGCATTTA AATTTGCAAA TCACCACCTA AACTACCTTG ATAAATTTCT TTACCATCCG
CTCTTTACGG CCTACGCGTA TAACGGCGGC ATCGGCTTTA CCAAAAAAGT CATCACAAGA
GATGATATGT TTAAAGAGGG GAGATTTGAG CCATTTTTAT CGATCGAGCT AGTCCCAGTG
GCTGAGACTA GAAACTACGG CAAGAAGGTG CTTGCAAACT ACGTGATCTA TATGGCGCTT
AATGGTTCCA GTATAAAGAT TTCGCAACTT TTCGAAAATT TAACAAAACC GGCTTTGACT
GATAAATTTC GAAACTAA
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| Protein sequence | MFLLRLFSII SLACVALLAK IYTYEELKNE PKSLAKDYYI NRLINEGSYT KEQIAELSRD
VFRKSGLVQK SINKILPPKA APSKCPGISA SNITSASLAC QNLLTTMSFS LKLDSKTREI
LAANLANTNP EKARILRTLN EPNPALSFAN ANDIKSFLEL FNASNPQSKS ALFSVNFEAN
FMNKLYMQKG FTNLLNDVVF NKKYESFRRN LLSIDPAVTE KSDAFTLGLN AILLGQNDVA
FSFFTRAKNT FDRAWQRDNA TFWQYELSGD QSFLKELSAS KDANIYSLYA RDLVGGEPLE
VIVPRPSKQN IENFDVSDPF LWNKTTSLAK DMNATQASEF AMKFYTNESI GAYAYFMQKA
HGWEKQYFLM PNSPELEDIS TERKSMIYAL ARQESLFIPS VVSTSYALGM MQFMPFLANA
IGKKELKIPN FDQDDLFKTD VAFKFANHHL NYLDKFLYHP LFTAYAYNGG IGFTKKVITR
DDMFKEGRFE PFLSIELVPV AETRNYGKKV LANYVIYMAL NGSSIKISQL FENLTKPALT
DKFRN
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