| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1537 |
|---|
| Symbol | |
|---|
| ID | 5597664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 520031 |
|---|
| End bp | 520468 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929107 |
|---|
| Product | putative metalloprotease |
|---|
| Protein accession | YP_001466415 |
|---|
| Protein GI | 157164120 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.576398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTTT GCGAAGAGAG TTATCCCGAA ATTTTAGATC AAATTTGCTC ATATCTAACG
CCTGGAGAAG TTGAGCTTTT ATTTATCAAC AAAGATGAGA TGAGAGAGCT AAACAGATCT
GAGCGTGGCA TAGACAAAAC CACTGACGTC TTAAGCTTCC CACTTGAGCT TGTCATACAC
GCTCCACTTG GCTCAATCGT CATAAATAAA GATATGGTAA AAGAAAAAGC AGCCGAGCTA
AATCACAGCG AAGATGCTGA AACTGCGCTA CTTTTCACAC ATGGCTTGCT GCATATCTTG
GGTTATGATC ACGAAAAAGA TGATGGGCAG ATGAGGGAGA AAGAGTGCGA AGTGATAGCT
AAATTTAACT TGCCAAAGAG CCTAATCGTA AGAAGCGAGG ACGTTAGACT CATTGATCTT
ATAAACAAAA AGGGCTGA
|
|---|
| Protein sequence | MILCEESYPE ILDQICSYLT PGEVELLFIN KDEMRELNRS ERGIDKTTDV LSFPLELVIH
APLGSIVINK DMVKEKAAEL NHSEDAETAL LFTHGLLHIL GYDHEKDDGQ MREKECEVIA
KFNLPKSLIV RSEDVRLIDL INKKG
|
|---|
| |