Gene CCC13826_1526 details

Gene Information

• Locus tag: CCC13826_1526
• ID: 5596875
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 508464
• End bp: 508856
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640929096
• Product: nodulation efficiency protein D (NfeD)
• Protein accession: YP_001466404
• Protein GI: 157165675
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAAGTC CTTTTATAAT GATAGCCATC GGCGCGCTCT TGTGCGTGGC TGAGCTTATG 
CTATTTTCAT TTTATCTGCT CTTTTTTGGC GTCGCTTTTA TCATCGTTGG GGCGATAAAT 
TTTGGCTTTG GTTTTGAGTG GAGCTTTCAA ATTTTAGCTG TCTTAGCGCT TGCCTTTATC 
TTGCTTGCAC TCTTAAAGGC GCCGTTAAAG AGTAAATTTA TGGCCAAAAA AGAGAGCTTT 
AACGAAGAGT TTTTAGATGA GCCAGGCGTT GGCGAGATCA GAGAAAATAT GGTCTATTTT 
AAAGGCACTC TTTGGAAGTA TGACGGAGCG CTAAAAAACG GCGAGAAAGT GCAGGTTTTA 
GGCACTAAAG GCGACAAGGT TATATTAAAA TAA 

 

Protein sequence

MISPFIMIAI GALLCVAELM LFSFYLLFFG VAFIIVGAIN FGFGFEWSFQ ILAVLALAFI 
LLALLKAPLK SKFMAKKESF NEEFLDEPGV GEIRENMVYF KGTLWKYDGA LKNGEKVQVL 
GTKGDKVILK