Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1514 |
Symbol | |
ID | 5595594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 497025 |
End bp | 497732 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640929085 |
Product | hypothetical protein |
Protein accession | YP_001466393 |
Protein GI | 157164445 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0105441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGAG CATTTGAGTA CCGAAGAGCG GCAAAAGAAG CTAGATGGGA TAAGATGAGC AAGGTATTTC CAAAACTTGC AAAGGCTATA ACAGTAGCGG CAAAAGATGG CGGATGTGAT CCAGATATGA ACCCAAAACT TCGTGCAGCC ATCGCAGCAG CAAAAGCTGA AAATATGCCA AAAGATAACA TCGATGCGGC TATAAAAAGA GCAAATGGCA AAGATAGTGC AGATATCAAG ACTATCTTTT ATGACGGCAA AGCAGCTCAC GGCGTGCAAA TCATCGTTGA GTGCGCTACT GACAACCCAA CAAGAACGGT TGCAAATGTA AAAGCGATAT TTAGCAAAAA TGGCGGAGAA ATTTTACCAA GCGGCAGCCT TAGCTTTATG TTTACAAGAA AGAGCGTTTT TGAGCTTGAA AAACCAAGTG CTAATATCGA AGAGATCGAG CTTGAGCTGA TTGATTATGG ACTAAGTGAC ATCGAAGAAG ATGAAAACGC GCTATTTGTT TATGGCGATT ACGCAAATTT TGGCACACTT CATGAAGGCA TAGAGAAGCT AAATTTAGTA GTTAAAAAAG CTTCACTTCA GTACTTGCCA AATCAAACCG TGAGCCTAGA TGAAGAGCAA ATGCTTGAGG TTGAGAGGCT TCTTGACAAG CTAGAAGACG ACGATGACGT CCAAGCAGTT TATACAAATA TCGAGTAA
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Protein sequence | MGRAFEYRRA AKEARWDKMS KVFPKLAKAI TVAAKDGGCD PDMNPKLRAA IAAAKAENMP KDNIDAAIKR ANGKDSADIK TIFYDGKAAH GVQIIVECAT DNPTRTVANV KAIFSKNGGE ILPSGSLSFM FTRKSVFELE KPSANIEEIE LELIDYGLSD IEEDENALFV YGDYANFGTL HEGIEKLNLV VKKASLQYLP NQTVSLDEEQ MLEVERLLDK LEDDDDVQAV YTNIE
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