| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1449 |
|---|
| Symbol | |
|---|
| ID | 5595998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1165547 |
|---|
| End bp | 1166194 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929720 |
|---|
| Product | LysE family translocator protein |
|---|
| Protein accession | YP_001467002 |
|---|
| Protein GI | 157165434 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | [TIGR00948] L-lysine exporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0643265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTAAATT TAAGCCAAAC TTTAGCGATA AGGATAAATT TGCAAGCATT TATATCTGGA
TTTTTTACCT CTTTATCGCT CATTTTAGCC ATTGGCGCAC AAAACGCTTT CGTGCTAAAA
CAGGGCATCA AAAGAGAAAA TATCTTTATC ATCTGCCTTA TTTGCGCTAT TAGCGACGCA
GCCTTGATCT TTGCAGGAGT TTTTGGACTT GCTAGCCTCG TGCAAAATTT TTCTATCATC
AAGCAAATCG CCCTATATGG CGGCTTTTTA TTTTTACTTT TTTACGCGCT AAAGAGCTTT
CACTCGTGCT TTTTTAAGGA CCTTAGCATG GATACCAGCA GCGATTATGC CAGATCAAAT
TTAAAGAAAA ACATCCTTTT AACGCTCGCA TTTACTTGGC TAAATCCTCA CGTCTATCTT
GACACCATGA TACTAATAGG CTCGGTTTCT ACTAATTTTA AAGATGAAAA TTTGATATTT
GGCGTGGGGG CCAGCCTTGC CTCGTTTTGT TTTTTCTTCG CACTTGGCTA TCTGGCTAGG
TTTTTAGCGC CCATCTTTGC AAGACCCATC TCTTGGAAAA TTTTAGAGTT TTTTGTCGGC
CTCATCATGC TCGCCCTTGC TTTCATGCTC ATTTTTGCTA GCTTCTAG
|
|---|
| Protein sequence | MLNLSQTLAI RINLQAFISG FFTSLSLILA IGAQNAFVLK QGIKRENIFI ICLICAISDA
ALIFAGVFGL ASLVQNFSII KQIALYGGFL FLLFYALKSF HSCFFKDLSM DTSSDYARSN
LKKNILLTLA FTWLNPHVYL DTMILIGSVS TNFKDENLIF GVGASLASFC FFFALGYLAR
FLAPIFARPI SWKILEFFVG LIMLALAFML IFASF
|
|---|
| |