| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1445 |
|---|
| Symbol | |
|---|
| ID | 5595967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1160754 |
|---|
| End bp | 1161533 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929716 |
|---|
| Product | PHP domain-containing protein |
|---|
| Protein accession | YP_001466998 |
|---|
| Protein GI | 157165198 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
|---|
| TIGRFAM ID | [TIGR01856] histidinol phosphate phosphatase HisJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0813592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG ATCTTCACAA CCACACACCT CTTTGCAACC ACGCAGTTGG CGAGCCACTA
GAATTTGTGA GATGCGCCAT AAAAGCTGGC ACAAGATACT TTGGCTTTAG CGATCACGCG
CCGATGAACT ACGATGAAGC TTATAGGATG AAATTTGAGG AGATGCAAAG CTACGAAGAC
GAAATTTTAC GTTTAAGAGA TGAATTTAGC GGCGAGATAG AAATTTTGCT TGGCTATGAG
ATGGACTTTT TAGATGGCTT TATGGATGAG CGAGTTTTTG CTAGAAAGGT TGATTATCTA
ATAGGCTCTG TGCATTTTTT TAACGGCTGG GCGTTTGACA ACCCTGAATT TATCGGCGGC
TACGAGGGCA AAGACTTGGA TCAAATTTGG CAGGAGTATT TTGACCACAT AGAAAGATCG
GCTAGGCTTG GCAAATTTGA CATCATGGGG CACATCGATC TTTTAAAGCT ATTTAAATTT
TTACCTAAAA AAGATGTCAG GATCCTAGCC AAAAACGCAG TAAAAGCAAT AAAAGAGGCA
AATTTGGTAG TTGAGATAAA CGCAGCTGGC TTTAGAAAGC CTATCGGCGA GCAATATCCA
AGCGTAAATT TACTAGAGTT AATCGCCGAA AATGACATCA CTATCACCTT TGGCTCAGAC
GCTCATGCCA AAGAAGACAT CGGTAAAAAT GGCGAAATTT GCGAGCAGAT AGCTAGAAAT
TTGGGATATT CAAAGTGTGC GATATTTAAA AACAGAGATA GAGAATTAGT AAAATTTTAG
|
|---|
| Protein sequence | MTVDLHNHTP LCNHAVGEPL EFVRCAIKAG TRYFGFSDHA PMNYDEAYRM KFEEMQSYED
EILRLRDEFS GEIEILLGYE MDFLDGFMDE RVFARKVDYL IGSVHFFNGW AFDNPEFIGG
YEGKDLDQIW QEYFDHIERS ARLGKFDIMG HIDLLKLFKF LPKKDVRILA KNAVKAIKEA
NLVVEINAAG FRKPIGEQYP SVNLLELIAE NDITITFGSD AHAKEDIGKN GEICEQIARN
LGYSKCAIFK NRDRELVKF
|
|---|
| |