Gene CCC13826_1423 details

Gene Information

• Locus tag: CCC13826_1423
• Symbol: cas
• ID: 5597086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 1145675
• End bp: 1146175
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640929695
• Product: CRISPR-associated protein Cas4
• Protein accession: YP_001466977
• Protein GI: 157164843
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1468] RecB family exonuclease
• TIGRFAM ID: [TIGR00372] CRISPR-associated protein Cas4

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.283584
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTCAA AAGATCAGAT CACTGGCACG CTTGTGAATT ACTACGTTAC CTGTAAGCGC 
GAGGCGTGGC TTTACGCACA TCAGATCCAC GCGGACCAAG AGGATGAAAA CGTGCTGATG 
GGCAAGGCTT TGGCTGATAT CAAAGAGCGA GATCTGCAAG AATTTGCCTT TGGCAACCTT 
AAATTTGACA AACTCTCAAA ACAACACGGT CACTACCTCA TCACAGAGTA TAAGAAAAGC 
CTAAAAAACG AGCTTGCAGG CAAGATGCAA CTACTTTTTT ACATCTATCT TTTAAAAACG 
GGCTTAAATT TAAAAGAGGT AAAAGGCAAG CTAATAAGCG GTAAAAAGGT GATTTTAGTG 
GAGGATAGCA GCGAAAATTT CGCTCTAGTA GAGCAAATTT TAAGCGAGAT AAGCGCGCTT 
GCAAATTTAG AAAAGCCGCC CAAATTTACG CAGGGTAAAT TTTGCCAAAA CTGCGCATAT 
CACGACTATT GCACTGCTTA G 

 

Protein sequence

MFSKDQITGT LVNYYVTCKR EAWLYAHQIH ADQEDENVLM GKALADIKER DLQEFAFGNL 
KFDKLSKQHG HYLITEYKKS LKNELAGKMQ LLFYIYLLKT GLNLKEVKGK LISGKKVILV 
EDSSENFALV EQILSEISAL ANLEKPPKFT QGKFCQNCAY HDYCTA