| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1420 |
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| Symbol | csh |
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| ID | 5597475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1141843 |
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| End bp | 1142784 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640929692 |
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| Product | CRISPR-associated protein, Csh2 family |
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| Protein accession | YP_001466974 |
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| Protein GI | 157164626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02590] CRISPR-associated protein, Csh2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.634971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA AAGAGATACT TTTTTTATGG GATGGAGAGA ACTGGAACCC AAACGGCGAT
ATGCTAAAGG ATAACGCTCC TAGGCGAGAT GATGAAACTG GCGTAGCTGA GGTGACGGAC
GTGCGTATAA AAAGGACTAT TAGAGATGAG ATAATGAAAA AAGATGAGGC GTCGATTTTT
ATAAAGGAGT ATAGGATAGA GGACGCCCTA CTAGACGCTA AAACTGCGAT CAGACAAAGT
ATAAATATAA AGCAAAACAA AAGCGAACTG CAAAAAGAAA TTTTGTCTAA ATTTATCGAT
ATCCGCGCAT TTGGCGGAGT TTTGCCTATT TCAGATAAAG ACAAGATGAA GCAAGACAAA
GAGATAAAAA CCGCAGGCGT TCAATTTACT GGGCCAGTGC AGTTTAGACT AAGCAAATCC
CTAAACAAGG TCGAAGTAGA GCATGTTAAA GGAACTGGCG CTTTTTCTAG CGACTACGAT
CCAAACGACC CAAAAAAACA AAAAGATCAA GCGACTTTTA GAGAAGAGGA ATTTATAAAA
TACGCTATTT TTGCTACTTA TGGCATCATA GATAACTATA ATGCAGCTAA AACAGGCTTT
AGCGAAGCCG ATGAGGCTAA AATTTTAAAA GCTTTGTGGC ACGGCACTAA AAACCTAACA
ACTCGCTCCA AAATCGGTCA GACTCCGAGG TTTATGCTAA TCATCACATA CAAAGACGAT
ACGTTTGCAG GCGATCTAAA CAATAGCATA AGCCTAAAAA GCGAAAAAGA AGATAGAGTG
ATAAGAAGCA TCAACGAATA CACTATCGAC TTTACAAATT TAAAAAATAA ACTCGCAAGA
TACGCCGCAA ATATAGAAAA GATAGAGTAT ATGAGCGATT ATGATTTTGA AACGATAAAC
AAAGAAAATT TTGACAGCAG TTGGAAAAAG ATAGAGGTAT AA
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| Protein sequence | MQKKEILFLW DGENWNPNGD MLKDNAPRRD DETGVAEVTD VRIKRTIRDE IMKKDEASIF
IKEYRIEDAL LDAKTAIRQS INIKQNKSEL QKEILSKFID IRAFGGVLPI SDKDKMKQDK
EIKTAGVQFT GPVQFRLSKS LNKVEVEHVK GTGAFSSDYD PNDPKKQKDQ ATFREEEFIK
YAIFATYGII DNYNAAKTGF SEADEAKILK ALWHGTKNLT TRSKIGQTPR FMLIITYKDD
TFAGDLNNSI SLKSEKEDRV IRSINEYTID FTNLKNKLAR YAANIEKIEY MSDYDFETIN
KENFDSSWKK IEV
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