| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1418 |
|---|
| Symbol | |
|---|
| ID | 5596124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1139203 |
|---|
| End bp | 1139895 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640929690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466972 |
|---|
| Protein GI | 157165727 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0314248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTA TAAATTCACG CCTACCAACT CAAAATTTAA AAATAGCAAA GTCTTTATCT
AAGCTCATAC AAGGCTATAT TTATAGCTAT TTGCCAAAGG CTGAACATGA CGGATACACA
CATAAAGAGA GTGGTAAAAA TTTTAAAAGA TCAAATTTTG ATTTTAGATT AAATGGTTTA
AGTTTAGAGA TAAGATTTAG CTCGTTTGTG CCAGAATTTG AAAAAACGAT AGCTTTTGCT
GTACTAAAAG ATGGATTAAA ACTTGGCAAT ATTTGTTTGC TTGATACATC TGTCTCAGTA
AAAGAGCATA GAATTTCACA AAATGAAGCT ACTTTTCAAG GATGCGTAGC GTGTTCAGTT
ATTGGGCTTT TGGGATACAA AGTGCATCTT GAGCCGCAAG ACTCCAGGCA TTTTGAAATA
ATGAAAACAA ACGCGCTACA AAGATTTGAA ACACTTATGG GGTATAAATA CGATGGCGAA
TTTGAGCTAA ATTTGCTTTG GCAAAATTTA CAAAAGCCAT TATATTTTTA CTACGGCAAC
AACAATATGC CAGTCAGAGC ATGGCCTGCA AAGTGGCATA TCAAAGCAAG GCCAGAGCTT
ATAAATTTGA TCCTTGATGT GGGTGTTGGT AGTGGATGTA TGAACTGCGG ACTTGGATTT
TTAGAAGTAG TAGAAGAAAA GCAAGCTATG TAA
|
|---|
| Protein sequence | MIIINSRLPT QNLKIAKSLS KLIQGYIYSY LPKAEHDGYT HKESGKNFKR SNFDFRLNGL
SLEIRFSSFV PEFEKTIAFA VLKDGLKLGN ICLLDTSVSV KEHRISQNEA TFQGCVACSV
IGLLGYKVHL EPQDSRHFEI MKTNALQRFE TLMGYKYDGE FELNLLWQNL QKPLYFYYGN
NNMPVRAWPA KWHIKARPEL INLILDVGVG SGCMNCGLGF LEVVEEKQAM
|
|---|
| |