Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1407 |
Symbol | |
ID | 5597137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1126810 |
End bp | 1128021 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640929678 |
Product | hypothetical protein |
Protein accession | YP_001466964 |
Protein GI | 157164030 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00365871 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TAGCTTTTTT TCTCTTTTTT AGCAGTTTTC TTTTTGTAAA TTTACACGCA TTAGAGTGCA GTGACCTTGC TAAAAAAGAG ATCTTTAAAA CTACTCCAAA TGAGCTTGCT TACGCGAATG AGGGGCTGTT TTTTTGTGAT GGCTCGCTTT TAAATTTAAA AGAGGTAAAA GAGCTTTTTG ATGCGAGTGT GGCTGTTAGA AGCGAGTCTC AAAGCTGTGT TGGCGAGGGC GTTTATAGAG AAAATTTAAA TAAATTTAGA TGGATCTTAC TAAAGGCTTC ATTTGCCCCT GAAATCTATC AAAAAGAGCT TGCAAAGCCA GAGGCGGCTG AGGCTCAAAA AGACGCTCAA ATGGAGTATT TTAGATACTG GGCGAATGAG AGCTTGTTTA ACTTCTTAAA ATATAAAAAA TTTAGCGAAG CTTATAAAAA CGCTCAAACT CCGCTAGTTA AATTTTACGA GGCTTTGGGC GTTGATAGTG CAAGTGCCGC TTACTACGCA ACTAGCGTGA TAAATGAGTT TTTAAGCTTT AGTGTCGGCA AAAAGGTAAA TAAGGCTAAG GCTCTAACTT CTGAGCAAAA GATGATGGCG CAAAAGCTAA GTCAAGACGA GCTTGCAAAT TTGCTTTATT CTAAAAATTA CAGCACCGCT GAGCTTACAA ATTTACTTGA TATCGCACTG CTAAATGACA AAAGTAGCGA GATGATAGAA GAGATCATAA GGCGCGGGGC TGACGTAAAT TTAGGCGATG AAACGCCGCT ATTTTTTGCT CTTAAAAATT TAGAAAATGT GAAAATTTTG CTTAAAAATA GAGCCGATGT AAATCACAAA AATTTCTTTG GCAAAAGTGC GCTCTTTTAT GCTGTGCAGT TTGAGGATGC GCCTCTTTGT GAGCTTTTGC TAAAGAGCGG GGCAAACGCG AACGAGAGCT ACATCGACGA GCAATCTAAG ATGAATATGA TAAATTTAGG CATGATGCAA GTAGAGGATA CGTGTGGTTT GGAGCATACA AACAGAAGCG TTTTCATGCA TGCAGCAGCT CACGCGACGC CAGAAATTTT AAAGCTTTTG ATAGATAACG GTGCCGATAT GAATGCCACT GACGATGCTG GATTTAACGC GCTTGATTAT GCGATTAAAG ATAAAAACGA AAAAAATATT AAATTTTTAG AAGAGCTTGG TTTAAAACCA AATTTTAATT AG
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Protein sequence | MKKVAFFLFF SSFLFVNLHA LECSDLAKKE IFKTTPNELA YANEGLFFCD GSLLNLKEVK ELFDASVAVR SESQSCVGEG VYRENLNKFR WILLKASFAP EIYQKELAKP EAAEAQKDAQ MEYFRYWANE SLFNFLKYKK FSEAYKNAQT PLVKFYEALG VDSASAAYYA TSVINEFLSF SVGKKVNKAK ALTSEQKMMA QKLSQDELAN LLYSKNYSTA ELTNLLDIAL LNDKSSEMIE EIIRRGADVN LGDETPLFFA LKNLENVKIL LKNRADVNHK NFFGKSALFY AVQFEDAPLC ELLLKSGANA NESYIDEQSK MNMINLGMMQ VEDTCGLEHT NRSVFMHAAA HATPEILKLL IDNGADMNAT DDAGFNALDY AIKDKNEKNI KFLEELGLKP NFN
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