| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1343 |
|---|
| Symbol | tyrA |
|---|
| ID | 5595931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 904340 |
|---|
| End bp | 905713 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640929469 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_001466764 |
|---|
| Protein GI | 157165223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.334497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA CTTTTGAGGG CTCTTTAGCC ATTGTTAGGC CATTTGGATT TTTAGAGGTT
AATATCACCC CTTCAAGCAT CAAAAAGGCC GAAGTAGAGC AAATTTGCGC AAGGCAGATA
AGTGCTATTT TGCTTTCATT AAAAAATGTC ACATTTTTTA GTCCTCTTTG GCTAAATAGC
ACATGCGAGC ATCTATCAAG CATCGCCAGA GAAATAGGCG CTGAGTTTGC AGTCTGCGAC
TATGACGATA CTTTTTACGA GCTTGTCGCA AAGACTTCAA AAAATATTTT GAGATTTTCA
CTCTTTGAAA ATGAAAAAGT TGCGACGCTA TTTTTAAACG ATACTTTAGC AGATAGCAGC
GAAGCCATCG TGATTTATAA CAAAAACGAG CAGTACAAAG ACTACATCAA CTCGCTTTTG
GAGCAAAAGT GTTACAAGTG TAAATTTGTA AAAAGCGTGG AAGAATTTAA CGCCGCCAAG
CAAGCTTACA AATACACCAT CAGCACTCTA AATCACATCG TTTTAGGCAA AAAAGAGTTT
AGCGCCTTTA TAAGAGGTGA CGTCGTCATT TACAAGACGG CAGGGCTCAT AGATAGCTCT
TTTGTGCAGA AATTTGACTA TAAATTTCAC GAAAGGTTGC AAAAGGTAGG CTTTAAATTC
TTTGTTTTTT GGTCTGATTC GGTCGGTGCT TTAAATACCA TAGGTGCTAG TTTTTTGATA
AAGCTATCTG AGCTGAGCCA AAAAAGTGGC GGTATATTGG CGATTTGCGG CTTAAATGAG
GGCAACATCT CAGAGACACT TGCGTCAAAT TTAAAAGCAG CAAAGATACT TTTATATAAA
AAGATGGATG ATTTTTTCAA AGATGACTCG ACGCTCTATT TTAAAAAGCG CCTTATCGAC
ATTGAGCCTA CAAAGATGAA TAAAAGCTTA GTTGAGTTTT TGCCACTTGT GATCTCAAGT
GTCACAGACG TGCTCTCGCC TTTGATAGAG AGTGAAATTT TATGCCTTGA TGCAAAGATT
AGCAACTTTA ACGTAGAGGG TGAAAATGAC TATCTGCGGG CTTGCGTGCT CTTTTATGGC
GACGTACAGA TGAGAATTTT GCTTGGTGTT AAAAAGGACA AGCTTAGCAA AATTTGCTCC
ATTTTTTCAG ATAATGGCGA TCTGGAGTGT GGCTGTTTAA GCGGATTTTC TCAAATTTTT
AGTATCATTG CAAGCAAAAT TTTAGACATT TTCATCGAGA GAAATTTAAA GGTAAAGCTT
AGCAACTTTA AATTTTACGA AAATGAGATG TTTTTTGACA GAGCAAGCAG TGGAATTTTT
GCCACATTAA ATGCAAAAGA GAGCCAAACT GGCATGATTT TTATAAGTAA ATAA
|
|---|
| Protein sequence | MKVTFEGSLA IVRPFGFLEV NITPSSIKKA EVEQICARQI SAILLSLKNV TFFSPLWLNS
TCEHLSSIAR EIGAEFAVCD YDDTFYELVA KTSKNILRFS LFENEKVATL FLNDTLADSS
EAIVIYNKNE QYKDYINSLL EQKCYKCKFV KSVEEFNAAK QAYKYTISTL NHIVLGKKEF
SAFIRGDVVI YKTAGLIDSS FVQKFDYKFH ERLQKVGFKF FVFWSDSVGA LNTIGASFLI
KLSELSQKSG GILAICGLNE GNISETLASN LKAAKILLYK KMDDFFKDDS TLYFKKRLID
IEPTKMNKSL VEFLPLVISS VTDVLSPLIE SEILCLDAKI SNFNVEGEND YLRACVLFYG
DVQMRILLGV KKDKLSKICS IFSDNGDLEC GCLSGFSQIF SIIASKILDI FIERNLKVKL
SNFKFYENEM FFDRASSGIF ATLNAKESQT GMIFISK
|
|---|
| |