| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1331 |
|---|
| Symbol | |
|---|
| ID | 5596681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 914608 |
|---|
| End bp | 915777 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929479 |
|---|
| Product | M23 peptidase domain-containing protein |
|---|
| Protein accession | YP_001466774 |
|---|
| Protein GI | 157164560 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGTA TTTTTGTGAT TTTTGCAATA TTATGTATAA ATTTATATGC CATAAAACCA
ACTGTCGATG AGCTTAGTTG GCCAAATGGC AGCAGCTTTT TAAATTTCCT TGAGACAAAC
AAAATCCCAC TTTCACTTTA CTACAATCTA GCAAGCGAAG ATCAAGAGCT AACAGAAGAG
ATCATCGCTG GCACAAAATA TCAAATTTAC AAAGACGATA ACGGCGAAGT TAAACAAGCT
CTCATCCCCG TTAGTGACGA GCTTCAGATA CATATTTATA GAGATGACAA GGGTAAATTT
CAGCTTGAGT TTATCCCGAT CTTATACCAA AGCGAAGATA AAATTTTAGC CCTAAAAGTC
GATAAATCAG TCTCTGAAGA TATCTTTGAC TACACCGGCT CTGGCACGCT AGCACTTGGT
TTTAAAGAGG TTTTTAGCGG CAGCGGGATC GATTTTAAAA AGATAAACAA AGGCGATACG
ATCGCTATTG TCTATAACCA AAAACTACGC ATGGGACGCT CTTTTGGCAC ACCTGAAATT
TACGCAGCGA TGATAGAAAC TAAAAACAAA CGCTACGTGA TGTATAAATT TGAAGATAAA
TTTTATGATA AAAACGGCAA GAAAAATGAC AAATTTTTGC TCGTTCGCCC TCTTGCAAAC
GCTAGGATCA CATCAAATTT CACTCTAAAA AGATGGCATC CGATCCTTCA AAGATATAGA
GCGCACCTTG GGGTTGATTA TGGTGCTCCA AAAGGCACAC CGATCAAGGC TGCAGGCGAT
GGCACGGTCA AATTTGTCGG ACAAAAGAGC GGTTATGGCA GAACCGTCAT CATCTCTCAC
GCTGGCGGCT ACGAGACGCT TTACGCGCAC CTAAACGGCT TTGCAAAGGG CATAAGAAGC
GGTCTTAAAG TAAAACAAGG CACGCTAATA GCATACGTTG GCACAAGCGG TATGAGCACT
GGCCCTCACC TACACTTTGG CCTCTATCTA GGTGGCAAAC CGATCAATCC AGAAAGCGCT
ATCAAGGTCG TAAAAAATAT AGAAGACAAA AAAGAGTCTG CTAAATTTAA AGCAGTCATA
AATAGAAATG ATGAGCTGAT AAAACAGGCT CTAAGCAACG ACAAAGAGTA TCACAAGGTG
GAATTTTTCC CTAACGTAAT AGATTTTTAA
|
|---|
| Protein sequence | MPRIFVIFAI LCINLYAIKP TVDELSWPNG SSFLNFLETN KIPLSLYYNL ASEDQELTEE
IIAGTKYQIY KDDNGEVKQA LIPVSDELQI HIYRDDKGKF QLEFIPILYQ SEDKILALKV
DKSVSEDIFD YTGSGTLALG FKEVFSGSGI DFKKINKGDT IAIVYNQKLR MGRSFGTPEI
YAAMIETKNK RYVMYKFEDK FYDKNGKKND KFLLVRPLAN ARITSNFTLK RWHPILQRYR
AHLGVDYGAP KGTPIKAAGD GTVKFVGQKS GYGRTVIISH AGGYETLYAH LNGFAKGIRS
GLKVKQGTLI AYVGTSGMST GPHLHFGLYL GGKPINPESA IKVVKNIEDK KESAKFKAVI
NRNDELIKQA LSNDKEYHKV EFFPNVIDF
|
|---|
| |