| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1309 |
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| Symbol | |
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| ID | 5597356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1090608 |
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| End bp | 1092125 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640929637 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001466923 |
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| Protein GI | 157163995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0124805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGTTG GAGCAGGGTA TCTCTACGCC AAAAAGATAA ATGATGCAAA CTACAACATA
TTTTTAGAGC AGGCAAAAGC AAAGGCAAAA GCCATCGAGT ATGAAGCTGA GCTAACGCTT
AAAAACTCTA AAATTTCAGT GCAAGAGGCT GAATTTGAGG CTAAAAAAAG ATACGATGAC
AAGACTACAA AGCTTCAAAA AGAGTATGCA AGTAAATTTG ATGAGCTAAC CAAAAAAGAG
AAAATTTTGC TAAATGAGCA AGAGCTTTTA AATGAGAGCA AAGAGCTTTT TGAAAAAGAC
AAGCAAGATG CGAAGGTCAC TTACGAAGAG GGCTTAAATT TAAAAGCGAC TTATCAAAAC
AAAGTAGAAG AGGCGATAAG AGTGCTTGAG CACGCTGCTG GCTTAACGGA GGAAGAGGCA
AAAGAGGTCG TGCTTAAAAA GGTCGAGGAA AAGTCGCGTG CCGACATCGC TCACATCGTT
AGAAAATACG AAGAAGAGGC AAAAAGAGAG GCTAAAAAGA GGGTTAATTA CATCTTGGCA
CAGGCTACGT CAAGATTTGC TGGAGAATTT GCGGCTGAAC GTCTAATAAA TGTCGTAAAT
ATCAAAAACG ATGAGCTAAA AGGTAGGATC ATCGGCAAAG AGGGACGTAA CATCAAAACC
CTTGAAATGG TGCTTGGCGT TGATATCATC ATCGATGATA CCCCACACGC GATCATACTA
AGTAGCTTTA ACCTTTACAG GCGTGCGATC GCAACAAGAG TGATCGAGCT TTTGGTGGAG
GACGGTAGAA TTCAGCCTGC GAGGATAGAA GATCTTCACA AAAAAGTGAC TGAAGAATTT
GAGCAAAGCA TACAAGAAGA GGGCGAAAAC ATCGTCATGG ATCTTGGTCT AAATAAAATT
CATCCAGAGA TAGTAAAACT AATAGGCAAG CTTAAATTTA GAGCAAGCTA TGGTCAAAAC
GCCCTTGCTC ACAGCCTTGA AGTAGCTCAC CTTGCTGGCA TCATCGCAGC AGAGTGTGGC
GGAGATGAGA AGCTAGCAAA AAGAGCTGGC ATACTTCACG ACATCGGTAA GGCGCTAACT
CACGAGTATG AGGGCAGCCA CGTCGATCTT GGAGCTGAAA TTTGCAAACG CTATAAAGAG
CATCCAGTCG TCATCAACGC GATCTATGCT CACCATGGCC ACGAAGAGGC TACAAGCATC
GAAAGTGCTG CTGTTTGCGC AGCTGACGCA CTAAGCGCAG CTCGTCCAGG AGCAAGACGT
GAGGTGCTTG AGAGCTTCTT AAAACGTGTC GAAGAGATCG AAAATATCGC AAAAAGCAAA
GAGGGTATCA AACAAGCTTA TGCGATCAAT GCTGGCCGTG AGATCCGCGT CATCGCAAAT
GCTAAACTCA TAAATGACGA TGAGGCAGTG CTTGTGGCAA AAGAGATAGC TCAAGAGATC
GAGAGCAAGG TGCAGTATCC TGGTGAGATA AAAGTAAGCG TCATCAGAGA GACTCGCGCT
GTTGATTTTG CGAAATAA
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| Protein sequence | MGVGAGYLYA KKINDANYNI FLEQAKAKAK AIEYEAELTL KNSKISVQEA EFEAKKRYDD
KTTKLQKEYA SKFDELTKKE KILLNEQELL NESKELFEKD KQDAKVTYEE GLNLKATYQN
KVEEAIRVLE HAAGLTEEEA KEVVLKKVEE KSRADIAHIV RKYEEEAKRE AKKRVNYILA
QATSRFAGEF AAERLINVVN IKNDELKGRI IGKEGRNIKT LEMVLGVDII IDDTPHAIIL
SSFNLYRRAI ATRVIELLVE DGRIQPARIE DLHKKVTEEF EQSIQEEGEN IVMDLGLNKI
HPEIVKLIGK LKFRASYGQN ALAHSLEVAH LAGIIAAECG GDEKLAKRAG ILHDIGKALT
HEYEGSHVDL GAEICKRYKE HPVVINAIYA HHGHEEATSI ESAAVCAADA LSAARPGARR
EVLESFLKRV EEIENIAKSK EGIKQAYAIN AGREIRVIAN AKLINDDEAV LVAKEIAQEI
ESKVQYPGEI KVSVIRETRA VDFAK
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