Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1280 |
Symbol | |
ID | 5596318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1015706 |
End bp | 1020406 |
Gene Length | 4701 bp |
Protein Length | 1566 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640929575 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein |
Protein accession | YP_001466866 |
Protein GI | 157164674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGCG TTGGTGTCGT CGCAAAGATA AGTGGAAAAG TTTTTGTAAA ACGAAACGGA AAGTTGATTT TGCTAAAGCA GGGCGACGAG ATATTTTTGG GCGATGAGAT CATCACGCAA AGCAGCAACG ACACTATCGT TATAAATTTC GACCACGCTG CGCCTATCAC GCTACTTGAA CCACAAACTA TCATCATCAC AAAAGAGCTA TCAAATGCAA AATTTGACAC CCAAGGCAAT GAAGCGCAAG TAGAAGAGGA CAAGAGAAGG ATTTTTGGCG AGAGCGAAGA GTCTAGTAGC AAAAGCAGCG ACGAAAGCGC TCAAGGCTCT AGTCACCACT CTCATGGCTC AAGCCATGGT AGCGACACAG CAAGCATAAA TGGATCAAAT TTTGACACGC AAGGTCACAT CTCAAACGTA GTTTGGTTTG ATGGCGGTAC GCTAGAGCTT CCAGCTATCA TCTCAAGCGA GCCAGCAATG CCGGTTGGTT CTATTAGCGG AGCAGCGCCA GTGGTGGCCG AGCAAAAAGA GAGCGCTCCA GCTATACCAG CGCCTAGCAT TGCGCTTTTA AAAGACCTTG ATGGCGATGG TTATATCAAT ATCGCAGAAG CAGGCGGCGA TCCTAATCAC ACAAGCATGG CTGTTGCTTT TAACAACGAC TTTAGGCCAG GCGACAAAGT GACGCTAGAA GTTGTAAATA ACGGCACAAA GACCACGCTT TCTTACAAAG TAGACCCTGC AGGCACAAGC GTGATAAATG AAAACAATCC AAGCGAAATT CTACCTATCA CGCCAAATGC AACAAATCCA GACCAAAAAG AATTTATCAT CCCAAGCGTT GCTATCACGC CAAATGCCCC GTTTAATGTA AGCTCCAGCA TCACGCTAGC AAATGGTGCT AGCTCAGCTC CAGCAAAGGC GGCCGCAAGT GTTGATACCG TTACGCCAGC TCTTAGCTTT ACAAAGGTGA TTTTAGGCAA AGACCTAAAT GGCGACGGCG TGATAGACGC TAGCGAAAAT GGCTTTAATC CAGCCAGCAG TACCCCAAGC GACGATGCGA AGATCGTTTT ATCACCAAAT ATGAAAATAG GCGATAAGAT AAAGCTCACT ACCACTGATC CTGACGGCAC TTTGCATGAA AAGACGCTTG TTAAAACATC TAGTGGCACG CTTGTGGATA AAGATAGTGG CGAGAGCTAT CCACTCACAA GTGAGAGCGG CGGAAATGTC GGCTTTAATG TGGCAAGTGC TGTTAAAATT TCATCATCAA CGCCAACAAA TGTAAATATC CAAATGATAA GCAAGTCGGG CAACCCAGGT GCGACAGATA TGGTAACTAT CGCAAATAAT AACGATCCGA TCGCTGTTTT TACCCTTGAT GAGAACAAAG ACGGCATTAT AAATGCAGCC GAACTAGCTA AAAGTGGCGG CACGGCGTCG CTTATCGATA TCTACGTACC AAACAATGCC GCAGTTGGCG ACAAGATCCG CATAAAGGTC GATGATCCAG CTAGCACACC AACAAGCGTT ACAAAGACCT ATACTATCGC ACCTGACGGA CTTACTGCCA CGCTTGATGG AGGTAGCGAG ACTATCTCTA TCCAAAATGG CAAGATCACA GTCGCTGACC CTACAAGCTC AACTGATCCA AGTAGGAAAA AGCTAAGCAC GACGATCATT GATGGCACGA CTGGAGCTTT AAAAGCTTCA AGTGTGAGTG AAATTTCAAG CGATACTGTC GCACCTGTTA GGTCTCCGCA CGTGCAGTTT GCAAAAGATA GCGATAAAGA CGGCGTGCTA ACTAGTAAAG AGAGTGGCTT TAGTCCTGAT GGTGCGAAAA CCTCTATAAA GATGAAAATT CCAAACGACG CAAGAGATGG CGATAAATTT GAGATAGATA TCGCAGGAAG CGACGGCAAA ACAGATAAGA TAACCATTAA AATTTCTCAA AACGCATCCG GCGCATATAG TGCCACAAGA GATGATGGCG TAGCTATTAG TGTAAATAAT GGCACCATAG AGACCACGAC AAAACTTTAT GGCGTTACGA CAAATTTCAC GACCACATTT ATCGACAAAG CTGGCAACAA AGCAGACCCA GTCACAGACG AGATCACTGT AGATAACAGC ATAAAGGTGC AGTTTGCAAG GGATAATGAC GGAGACGGGC TAATAGATAG CATCACAACC CCTTCTGGCT CACCATCAAC CCAAAGCGAC CTTGATATCT ACGTGCCTAG CAATGCAAAA CCAGGAAGCA ATGTAAGCGT CACTATCTCA ACTCCGACCA TACCAGCCGT AACTACAACG GTCAAATACA CAATAAGCGA CGATGGACTA ACTGCCTTGC CAAATGACGG CTCAGCGCCA CTTCCTATCG TGGATGGCAA ATTTAGCATA CCAAATGTCC CTATCTCTGT CGATCACTCT ACGCCTGTTA GAGCCACTAT CACGACACCT AACGAGGTCA CCACAACTGA TGGCGTTCGC GGTAGGCTCT TTGACTTTGG AATCTTAAGC TACATAGATG ACGTCAAGCT TGCTACGCAG ATAGATGGCG GAGCAGTAAA TATCGCTAAA TATCTTAGAG TGGAGGACTA TGAGAAGGTT ATCCAGAAAA ATAACTTCGA TGATGAGACC AAAACTATAA AAGAGTATAA CATCTCACTT ACTAATGACG AACAACCAAA CATTGTATTT GGCGTGGACC GCGACCCTGG CACAAAGCTT CGTTTAGCAC TTGAAGATGA TCATGGTAAT GTCAAAATTT TACCAAGCGG GCAAACATAT ATAGATCTAA CAGTCGGCGC AGATAAGCGT GTAAATATGG ACTTTGAGGC CCTTGGTATA AAGCTAGATG AGAGATACTC AAACATAAGA GCGACCGTTT TAAAGAGTGA TGACACAAAG GATGATGATC TAATAGTTCA CGTAGATCTA GACGCCACCC CTGATGCGAT CGGCACTCCA ACGGCAACTT CACATGTAAC TAGTGTAGAT ATCTCAGGTA GTGTTGGCAC CGATGCGAGC GGTAATAACA CGCTAAATAA AAACACCATA AACAAAGTAG ATCTTTATGA TCTGCTAAAT TCCGTCCACA AAAGTTCAGC CCTTGATGAT ACACACAGCT ACTCTGAAAA TTTTGCCCTG CCAGCAAACA GCACTGGAGC AAATTTCATG ATAAAAAATG CCGACACCGC AGGAAATGTC TCTGTTAGCA CGGTGACTTT TATCGGCAAC AGCGGCCTTG ATGCTGATAT GTGGTTTTAT AACTACGTAG ATCCATCGTG GAGGGCTAGA GTTGGTGGCG ATTCTGGTGT TTACTCGCAG CGAGGGGGCA AATCCATCTA TAAAGACTAT ATCAAAATTT ACTCTCCAAG CGCCTCTACT ACATATGACG TTGTGCAGTT TGCCTCTGGG ACGCACTATA AGACCCTGTC TGATCAGGGC AATATGCATG CAGAAGATCT AGCAAGAGTG GGTAGATATG GCAGTGATGC CTTGTATGAC GCATCTAATC CATACGCACC AAAGAAATTT AGAAACGGTG TAGATACAAC TGCTGGCACA GGAGAAAATA TAAGCTTTGC AAATGGCACA TTAAAAGGTA AACCTGGCAA CTACACGCTT GGAGAGTCAA ACCCTGTTGG CTCTGACCTT GTCATGAAAA TGGATGGTTG GATATATGTA AATGCTCCTG GAACATACTC AGTAAGAGCA GCCGACCTAC ACAACTATGT AGAGCTAACT ATAAATGGCA ATACACAAAA ATTTGGAAGT GCAACAACAT TTATAAATCC GTCCACAGAG GTATCATATG GCAAAAATGG TCAGTGGTGG AGCAGGGATT TTACATTTAA TAAGGCTGGC TTTTATAAAT TTGATATGGA GTATATGGAC GGAACTGGCG AGATGAATTT ATCTTTGTAT ATAATGCAAA AAAATAGTGC GCCAGCTAGT GGACCATATC CATCAGATAC TTTGGTGGGC TCAGAACATA GTGGCACTCG CCTTTTTAGT AACAACTATG TCGAAGCGCT CATTCAAAAT GATTTTATAA AAAAGATAGG CACTACAAAT TCTTACGAGA TAAATACAAG CAAATATAGC GAGGCAAATT TTGGAGACCC AATCTATCTA AAACAAGAAG GCGACGTAAA GGGAGGCAAC CTAGATGATG CTTTTGTTTA TAGTAAGGGC AGGGCGATAG ACGGCAAAGG TGGTGTAGAT ACGCTTATAG TAGTTGATGA TGTGGATTTT TCAAATTTAG ACAATGTTAA AAAGATAAAT AACTTTGAAA AAGTGCAACT TGGCAGTGCA GATCAAGCTG TATCTATAAA ATTTAGCCCA AATGGCATCT TTGACATCGT AGATAGTAGA AATACAAGAG ATGCGAGCAA TAGCGCAGCC AGCGAGAGCG TAAATACCGT GCTAAAAGTT ATAGGCGATA GTAAAGACCT GGTACAGCTT ACACATGATT TTGTAAAAGC CACAAAAGCA GATATCACCA CGCTAAATAA TAAACATAGC GTCGTTGGCG ATACATATAA TAAAGTAGAT GTTACAAGTG ATGGTGACGC GGTAAATCAA GTCTATAAAG CAACATTTAA TCGCCAAGAA ACTATCAATG GCAACACAAT AAATTCAAAG CATACCGTTT TTGTCGAGAT CCAAGACGGC GTGCAAGTTG ATCTGTTGTA A
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Protein sequence | MQSVGVVAKI SGKVFVKRNG KLILLKQGDE IFLGDEIITQ SSNDTIVINF DHAAPITLLE PQTIIITKEL SNAKFDTQGN EAQVEEDKRR IFGESEESSS KSSDESAQGS SHHSHGSSHG SDTASINGSN FDTQGHISNV VWFDGGTLEL PAIISSEPAM PVGSISGAAP VVAEQKESAP AIPAPSIALL KDLDGDGYIN IAEAGGDPNH TSMAVAFNND FRPGDKVTLE VVNNGTKTTL SYKVDPAGTS VINENNPSEI LPITPNATNP DQKEFIIPSV AITPNAPFNV SSSITLANGA SSAPAKAAAS VDTVTPALSF TKVILGKDLN GDGVIDASEN GFNPASSTPS DDAKIVLSPN MKIGDKIKLT TTDPDGTLHE KTLVKTSSGT LVDKDSGESY PLTSESGGNV GFNVASAVKI SSSTPTNVNI QMISKSGNPG ATDMVTIANN NDPIAVFTLD ENKDGIINAA ELAKSGGTAS LIDIYVPNNA AVGDKIRIKV DDPASTPTSV TKTYTIAPDG LTATLDGGSE TISIQNGKIT VADPTSSTDP SRKKLSTTII DGTTGALKAS SVSEISSDTV APVRSPHVQF AKDSDKDGVL TSKESGFSPD GAKTSIKMKI PNDARDGDKF EIDIAGSDGK TDKITIKISQ NASGAYSATR DDGVAISVNN GTIETTTKLY GVTTNFTTTF IDKAGNKADP VTDEITVDNS IKVQFARDND GDGLIDSITT PSGSPSTQSD LDIYVPSNAK PGSNVSVTIS TPTIPAVTTT VKYTISDDGL TALPNDGSAP LPIVDGKFSI PNVPISVDHS TPVRATITTP NEVTTTDGVR GRLFDFGILS YIDDVKLATQ IDGGAVNIAK YLRVEDYEKV IQKNNFDDET KTIKEYNISL TNDEQPNIVF GVDRDPGTKL RLALEDDHGN VKILPSGQTY IDLTVGADKR VNMDFEALGI KLDERYSNIR ATVLKSDDTK DDDLIVHVDL DATPDAIGTP TATSHVTSVD ISGSVGTDAS GNNTLNKNTI NKVDLYDLLN SVHKSSALDD THSYSENFAL PANSTGANFM IKNADTAGNV SVSTVTFIGN SGLDADMWFY NYVDPSWRAR VGGDSGVYSQ RGGKSIYKDY IKIYSPSAST TYDVVQFASG THYKTLSDQG NMHAEDLARV GRYGSDALYD ASNPYAPKKF RNGVDTTAGT GENISFANGT LKGKPGNYTL GESNPVGSDL VMKMDGWIYV NAPGTYSVRA ADLHNYVELT INGNTQKFGS ATTFINPSTE VSYGKNGQWW SRDFTFNKAG FYKFDMEYMD GTGEMNLSLY IMQKNSAPAS GPYPSDTLVG SEHSGTRLFS NNYVEALIQN DFIKKIGTTN SYEINTSKYS EANFGDPIYL KQEGDVKGGN LDDAFVYSKG RAIDGKGGVD TLIVVDDVDF SNLDNVKKIN NFEKVQLGSA DQAVSIKFSP NGIFDIVDSR NTRDASNSAA SESVNTVLKV IGDSKDLVQL THDFVKATKA DITTLNNKHS VVGDTYNKVD VTSDGDAVNQ VYKATFNRQE TINGNTINSK HTVFVEIQDG VQVDLL
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