Gene CCC13826_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1280 
Symbol 
ID5596318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1015706 
End bp1020406 
Gene Length4701 bp 
Protein Length1566 aa 
Translation table11 
GC content43% 
IMG OID640929575 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 family protein 
Protein accessionYP_001466866 
Protein GI157164674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCG TTGGTGTCGT CGCAAAGATA AGTGGAAAAG TTTTTGTAAA ACGAAACGGA 
AAGTTGATTT TGCTAAAGCA GGGCGACGAG ATATTTTTGG GCGATGAGAT CATCACGCAA
AGCAGCAACG ACACTATCGT TATAAATTTC GACCACGCTG CGCCTATCAC GCTACTTGAA
CCACAAACTA TCATCATCAC AAAAGAGCTA TCAAATGCAA AATTTGACAC CCAAGGCAAT
GAAGCGCAAG TAGAAGAGGA CAAGAGAAGG ATTTTTGGCG AGAGCGAAGA GTCTAGTAGC
AAAAGCAGCG ACGAAAGCGC TCAAGGCTCT AGTCACCACT CTCATGGCTC AAGCCATGGT
AGCGACACAG CAAGCATAAA TGGATCAAAT TTTGACACGC AAGGTCACAT CTCAAACGTA
GTTTGGTTTG ATGGCGGTAC GCTAGAGCTT CCAGCTATCA TCTCAAGCGA GCCAGCAATG
CCGGTTGGTT CTATTAGCGG AGCAGCGCCA GTGGTGGCCG AGCAAAAAGA GAGCGCTCCA
GCTATACCAG CGCCTAGCAT TGCGCTTTTA AAAGACCTTG ATGGCGATGG TTATATCAAT
ATCGCAGAAG CAGGCGGCGA TCCTAATCAC ACAAGCATGG CTGTTGCTTT TAACAACGAC
TTTAGGCCAG GCGACAAAGT GACGCTAGAA GTTGTAAATA ACGGCACAAA GACCACGCTT
TCTTACAAAG TAGACCCTGC AGGCACAAGC GTGATAAATG AAAACAATCC AAGCGAAATT
CTACCTATCA CGCCAAATGC AACAAATCCA GACCAAAAAG AATTTATCAT CCCAAGCGTT
GCTATCACGC CAAATGCCCC GTTTAATGTA AGCTCCAGCA TCACGCTAGC AAATGGTGCT
AGCTCAGCTC CAGCAAAGGC GGCCGCAAGT GTTGATACCG TTACGCCAGC TCTTAGCTTT
ACAAAGGTGA TTTTAGGCAA AGACCTAAAT GGCGACGGCG TGATAGACGC TAGCGAAAAT
GGCTTTAATC CAGCCAGCAG TACCCCAAGC GACGATGCGA AGATCGTTTT ATCACCAAAT
ATGAAAATAG GCGATAAGAT AAAGCTCACT ACCACTGATC CTGACGGCAC TTTGCATGAA
AAGACGCTTG TTAAAACATC TAGTGGCACG CTTGTGGATA AAGATAGTGG CGAGAGCTAT
CCACTCACAA GTGAGAGCGG CGGAAATGTC GGCTTTAATG TGGCAAGTGC TGTTAAAATT
TCATCATCAA CGCCAACAAA TGTAAATATC CAAATGATAA GCAAGTCGGG CAACCCAGGT
GCGACAGATA TGGTAACTAT CGCAAATAAT AACGATCCGA TCGCTGTTTT TACCCTTGAT
GAGAACAAAG ACGGCATTAT AAATGCAGCC GAACTAGCTA AAAGTGGCGG CACGGCGTCG
CTTATCGATA TCTACGTACC AAACAATGCC GCAGTTGGCG ACAAGATCCG CATAAAGGTC
GATGATCCAG CTAGCACACC AACAAGCGTT ACAAAGACCT ATACTATCGC ACCTGACGGA
CTTACTGCCA CGCTTGATGG AGGTAGCGAG ACTATCTCTA TCCAAAATGG CAAGATCACA
GTCGCTGACC CTACAAGCTC AACTGATCCA AGTAGGAAAA AGCTAAGCAC GACGATCATT
GATGGCACGA CTGGAGCTTT AAAAGCTTCA AGTGTGAGTG AAATTTCAAG CGATACTGTC
GCACCTGTTA GGTCTCCGCA CGTGCAGTTT GCAAAAGATA GCGATAAAGA CGGCGTGCTA
ACTAGTAAAG AGAGTGGCTT TAGTCCTGAT GGTGCGAAAA CCTCTATAAA GATGAAAATT
CCAAACGACG CAAGAGATGG CGATAAATTT GAGATAGATA TCGCAGGAAG CGACGGCAAA
ACAGATAAGA TAACCATTAA AATTTCTCAA AACGCATCCG GCGCATATAG TGCCACAAGA
GATGATGGCG TAGCTATTAG TGTAAATAAT GGCACCATAG AGACCACGAC AAAACTTTAT
GGCGTTACGA CAAATTTCAC GACCACATTT ATCGACAAAG CTGGCAACAA AGCAGACCCA
GTCACAGACG AGATCACTGT AGATAACAGC ATAAAGGTGC AGTTTGCAAG GGATAATGAC
GGAGACGGGC TAATAGATAG CATCACAACC CCTTCTGGCT CACCATCAAC CCAAAGCGAC
CTTGATATCT ACGTGCCTAG CAATGCAAAA CCAGGAAGCA ATGTAAGCGT CACTATCTCA
ACTCCGACCA TACCAGCCGT AACTACAACG GTCAAATACA CAATAAGCGA CGATGGACTA
ACTGCCTTGC CAAATGACGG CTCAGCGCCA CTTCCTATCG TGGATGGCAA ATTTAGCATA
CCAAATGTCC CTATCTCTGT CGATCACTCT ACGCCTGTTA GAGCCACTAT CACGACACCT
AACGAGGTCA CCACAACTGA TGGCGTTCGC GGTAGGCTCT TTGACTTTGG AATCTTAAGC
TACATAGATG ACGTCAAGCT TGCTACGCAG ATAGATGGCG GAGCAGTAAA TATCGCTAAA
TATCTTAGAG TGGAGGACTA TGAGAAGGTT ATCCAGAAAA ATAACTTCGA TGATGAGACC
AAAACTATAA AAGAGTATAA CATCTCACTT ACTAATGACG AACAACCAAA CATTGTATTT
GGCGTGGACC GCGACCCTGG CACAAAGCTT CGTTTAGCAC TTGAAGATGA TCATGGTAAT
GTCAAAATTT TACCAAGCGG GCAAACATAT ATAGATCTAA CAGTCGGCGC AGATAAGCGT
GTAAATATGG ACTTTGAGGC CCTTGGTATA AAGCTAGATG AGAGATACTC AAACATAAGA
GCGACCGTTT TAAAGAGTGA TGACACAAAG GATGATGATC TAATAGTTCA CGTAGATCTA
GACGCCACCC CTGATGCGAT CGGCACTCCA ACGGCAACTT CACATGTAAC TAGTGTAGAT
ATCTCAGGTA GTGTTGGCAC CGATGCGAGC GGTAATAACA CGCTAAATAA AAACACCATA
AACAAAGTAG ATCTTTATGA TCTGCTAAAT TCCGTCCACA AAAGTTCAGC CCTTGATGAT
ACACACAGCT ACTCTGAAAA TTTTGCCCTG CCAGCAAACA GCACTGGAGC AAATTTCATG
ATAAAAAATG CCGACACCGC AGGAAATGTC TCTGTTAGCA CGGTGACTTT TATCGGCAAC
AGCGGCCTTG ATGCTGATAT GTGGTTTTAT AACTACGTAG ATCCATCGTG GAGGGCTAGA
GTTGGTGGCG ATTCTGGTGT TTACTCGCAG CGAGGGGGCA AATCCATCTA TAAAGACTAT
ATCAAAATTT ACTCTCCAAG CGCCTCTACT ACATATGACG TTGTGCAGTT TGCCTCTGGG
ACGCACTATA AGACCCTGTC TGATCAGGGC AATATGCATG CAGAAGATCT AGCAAGAGTG
GGTAGATATG GCAGTGATGC CTTGTATGAC GCATCTAATC CATACGCACC AAAGAAATTT
AGAAACGGTG TAGATACAAC TGCTGGCACA GGAGAAAATA TAAGCTTTGC AAATGGCACA
TTAAAAGGTA AACCTGGCAA CTACACGCTT GGAGAGTCAA ACCCTGTTGG CTCTGACCTT
GTCATGAAAA TGGATGGTTG GATATATGTA AATGCTCCTG GAACATACTC AGTAAGAGCA
GCCGACCTAC ACAACTATGT AGAGCTAACT ATAAATGGCA ATACACAAAA ATTTGGAAGT
GCAACAACAT TTATAAATCC GTCCACAGAG GTATCATATG GCAAAAATGG TCAGTGGTGG
AGCAGGGATT TTACATTTAA TAAGGCTGGC TTTTATAAAT TTGATATGGA GTATATGGAC
GGAACTGGCG AGATGAATTT ATCTTTGTAT ATAATGCAAA AAAATAGTGC GCCAGCTAGT
GGACCATATC CATCAGATAC TTTGGTGGGC TCAGAACATA GTGGCACTCG CCTTTTTAGT
AACAACTATG TCGAAGCGCT CATTCAAAAT GATTTTATAA AAAAGATAGG CACTACAAAT
TCTTACGAGA TAAATACAAG CAAATATAGC GAGGCAAATT TTGGAGACCC AATCTATCTA
AAACAAGAAG GCGACGTAAA GGGAGGCAAC CTAGATGATG CTTTTGTTTA TAGTAAGGGC
AGGGCGATAG ACGGCAAAGG TGGTGTAGAT ACGCTTATAG TAGTTGATGA TGTGGATTTT
TCAAATTTAG ACAATGTTAA AAAGATAAAT AACTTTGAAA AAGTGCAACT TGGCAGTGCA
GATCAAGCTG TATCTATAAA ATTTAGCCCA AATGGCATCT TTGACATCGT AGATAGTAGA
AATACAAGAG ATGCGAGCAA TAGCGCAGCC AGCGAGAGCG TAAATACCGT GCTAAAAGTT
ATAGGCGATA GTAAAGACCT GGTACAGCTT ACACATGATT TTGTAAAAGC CACAAAAGCA
GATATCACCA CGCTAAATAA TAAACATAGC GTCGTTGGCG ATACATATAA TAAAGTAGAT
GTTACAAGTG ATGGTGACGC GGTAAATCAA GTCTATAAAG CAACATTTAA TCGCCAAGAA
ACTATCAATG GCAACACAAT AAATTCAAAG CATACCGTTT TTGTCGAGAT CCAAGACGGC
GTGCAAGTTG ATCTGTTGTA A
 
Protein sequence
MQSVGVVAKI SGKVFVKRNG KLILLKQGDE IFLGDEIITQ SSNDTIVINF DHAAPITLLE 
PQTIIITKEL SNAKFDTQGN EAQVEEDKRR IFGESEESSS KSSDESAQGS SHHSHGSSHG
SDTASINGSN FDTQGHISNV VWFDGGTLEL PAIISSEPAM PVGSISGAAP VVAEQKESAP
AIPAPSIALL KDLDGDGYIN IAEAGGDPNH TSMAVAFNND FRPGDKVTLE VVNNGTKTTL
SYKVDPAGTS VINENNPSEI LPITPNATNP DQKEFIIPSV AITPNAPFNV SSSITLANGA
SSAPAKAAAS VDTVTPALSF TKVILGKDLN GDGVIDASEN GFNPASSTPS DDAKIVLSPN
MKIGDKIKLT TTDPDGTLHE KTLVKTSSGT LVDKDSGESY PLTSESGGNV GFNVASAVKI
SSSTPTNVNI QMISKSGNPG ATDMVTIANN NDPIAVFTLD ENKDGIINAA ELAKSGGTAS
LIDIYVPNNA AVGDKIRIKV DDPASTPTSV TKTYTIAPDG LTATLDGGSE TISIQNGKIT
VADPTSSTDP SRKKLSTTII DGTTGALKAS SVSEISSDTV APVRSPHVQF AKDSDKDGVL
TSKESGFSPD GAKTSIKMKI PNDARDGDKF EIDIAGSDGK TDKITIKISQ NASGAYSATR
DDGVAISVNN GTIETTTKLY GVTTNFTTTF IDKAGNKADP VTDEITVDNS IKVQFARDND
GDGLIDSITT PSGSPSTQSD LDIYVPSNAK PGSNVSVTIS TPTIPAVTTT VKYTISDDGL
TALPNDGSAP LPIVDGKFSI PNVPISVDHS TPVRATITTP NEVTTTDGVR GRLFDFGILS
YIDDVKLATQ IDGGAVNIAK YLRVEDYEKV IQKNNFDDET KTIKEYNISL TNDEQPNIVF
GVDRDPGTKL RLALEDDHGN VKILPSGQTY IDLTVGADKR VNMDFEALGI KLDERYSNIR
ATVLKSDDTK DDDLIVHVDL DATPDAIGTP TATSHVTSVD ISGSVGTDAS GNNTLNKNTI
NKVDLYDLLN SVHKSSALDD THSYSENFAL PANSTGANFM IKNADTAGNV SVSTVTFIGN
SGLDADMWFY NYVDPSWRAR VGGDSGVYSQ RGGKSIYKDY IKIYSPSAST TYDVVQFASG
THYKTLSDQG NMHAEDLARV GRYGSDALYD ASNPYAPKKF RNGVDTTAGT GENISFANGT
LKGKPGNYTL GESNPVGSDL VMKMDGWIYV NAPGTYSVRA ADLHNYVELT INGNTQKFGS
ATTFINPSTE VSYGKNGQWW SRDFTFNKAG FYKFDMEYMD GTGEMNLSLY IMQKNSAPAS
GPYPSDTLVG SEHSGTRLFS NNYVEALIQN DFIKKIGTTN SYEINTSKYS EANFGDPIYL
KQEGDVKGGN LDDAFVYSKG RAIDGKGGVD TLIVVDDVDF SNLDNVKKIN NFEKVQLGSA
DQAVSIKFSP NGIFDIVDSR NTRDASNSAA SESVNTVLKV IGDSKDLVQL THDFVKATKA
DITTLNNKHS VVGDTYNKVD VTSDGDAVNQ VYKATFNRQE TINGNTINSK HTVFVEIQDG
VQVDLL