Gene CCC13826_1278 details

Gene Information

• Locus tag: CCC13826_1278
• Symbol: thiH
• ID: 5596332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 1013843
• End bp: 1014997
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640929573
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_001466864
• Protein GI: 157165154
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.173544
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTA CAAGAAACGA CCACATGAAG CTGCTACCTC ACATGCAGGA TGTTGGCAGC 
GACATTATGG ATGAGATTTT AAAAGAGTGC GCAAGCTACA AGCCAGAAAT TTACAGCGAA 
GCAGACGTAA AAGCAGCTCT TAATGCAAAG CACTGCTCGC TTGAAAATTT AAAAGCCCTG 
CTCTCGCCTG CTGCAGCACC ATTTTTAGAG CCAATAGCCC AGCTTGCTCA AGCAAAAACA 
AGGGCAAATT TTGGCTCAAA CATAACGCTT TTTACCCCGC TTTACATAGC AAACTACTGC 
GATAATCTCT GCGTTTATTG CGGTTTTAAC GCTAAAAATA ATATAAAAAG AGCAAAGCTG 
AGCGACGAGG AGATCACAAG AGAGTTAAGA GAAATTTCAA AGAGTGGCTT AGAGGAAATT 
TTAATTCTAA CTGGCGAGAG CGAGACAAAC TCAAGTGTCG CTTACATCGC AAACGCCTGC 
GCTTTGGCAA AGAAATTTTT TAAAGTCGTT GGAGTTGAAA TTTACCCATT AAACTCAGAG 
GGCTACGCCC TGCTTCACAA AAGTGGCGCA GACTACGTGA CCGTTTTTCA AGAGACCTAC 
AATCCCACAA AATACGAAAA AATCCACCTT GGCGGCAATA AAAGGATATT CCCATACCGC 
TTAAATGCGC AAGAGCGAGC GCTTCTTGGA GGCATGAGAG GAGTTGGCTT TGCCGCACTT 
CTTGGCATAG ATGACTTTAG ACTTGATGCC TTTGCGACCG CACTTCACGC AAGCTTAGTT 
CAAAAAAAGT ATCCGCACGC CGAGATCGCA TTTTCATGCC CAAGACTTCG CCCTATCATA 
AACAACGACC GCATCAATCC ACGCGACGTG GGCGAGCGCG AGCTTTTGCA AGTGATCTGT 
GCTTATAGAA TTTTCATGCC AACAGCTAGC ATAACGATCT CAACTAGAGA AAAGGCGAAA 
TTTCGCGACA ACGCCGTAAA GATCGCCGCA AATAAGATAA GCGCTGGCGT AAAAGTGAGC 
ATCGGCGCTC ACGGCGAAGA GAAAAAGGGC GACGAGCAGT TTGAGATAAG TGATAGCAGA 
AGCGTGGATG AGATAAAAGC AATGATAAAA GCAAACGGCC TAGAGCCCTT GATGAGTGAG 
TATGTCTATG TTTAA 

 

Protein sequence

MKFTRNDHMK LLPHMQDVGS DIMDEILKEC ASYKPEIYSE ADVKAALNAK HCSLENLKAL 
LSPAAAPFLE PIAQLAQAKT RANFGSNITL FTPLYIANYC DNLCVYCGFN AKNNIKRAKL 
SDEEITRELR EISKSGLEEI LILTGESETN SSVAYIANAC ALAKKFFKVV GVEIYPLNSE 
GYALLHKSGA DYVTVFQETY NPTKYEKIHL GGNKRIFPYR LNAQERALLG GMRGVGFAAL 
LGIDDFRLDA FATALHASLV QKKYPHAEIA FSCPRLRPII NNDRINPRDV GERELLQVIC 
AYRIFMPTAS ITISTREKAK FRDNAVKIAA NKISAGVKVS IGAHGEEKKG DEQFEISDSR 
SVDEIKAMIK ANGLEPLMSE YVYV