Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1276 |
Symbol | thiF |
ID | 5595893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1012227 |
End bp | 1013078 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640929572 |
Product | thiamine biosynthesis protein ThiF |
Protein accession | YP_001466863 |
Protein GI | 157163881 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0911002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGA TAGTACTAAA TGGCGCAAAA TTTAATGTGC CAGTAAAAAG CCTTAGCGAG CTAAAAGAGC TCGCTCTTGG CGATAAAGAG AGTGAAATTT ATAAATTTTT AGAGAAATTT AACGCGACAA AGCCAGATAT TTTTATCGTT GATGGCTTTG CCATAAAAGA AGATAGCGAG CTAAAAGATG GCTCAAACGT CGTATTTATA AGGCGTGGTG TGATGCCTGA GCGTGAAGTT TTACGCGCGA TGATCGCCTC ACGAAACAGC CCTGAGCTAA ATTTAGCCCT AAGTAAAGCG GTGATCGGCG TGGCTGGACT TGGCGGACTT GGCTCAAATA TTGCACTAAG CCTAGCTAGA GTTGGCGTAA AAAAGCTAGT GCTTGCCGAC TTTGACGTCG TTGAGCCAAG CAATCTAAAC CGCCAACAGT ATTTCGTCCG CCACATCGGC TTAAAAAAGA CGCAGGCGCT TAAAGAGCTG ATAAATGACG TAAATCCCTT TGTCGAGGTC GAAACTCACG ATATATTTTT AGATGAAAAA AATGTGGCTA GCGTCTTTGG CGAGTGCGAA ATTTTATGCG AAGCCTTTGA CAACGTCGCT GGCAAGGCGA TGATACTAAA CGAAGCTGGT GCCAGCCTAA AAGATAAAAA GATCATTGGC GCCTCTGGCA TGGCAGGTTA CTTTAGCTCA AATATCATAA AAACCATAAA ATTTGCCAAA AATGTCTATC TTTGCGGCGA CCTCACAAAC GAGGCAAAGA TCGGTCAAGG GCTAATGGCG CCGCGCGTCG CAGTCTGCGC AAATCACGAG GCAAATTTAG CCATTAGACT ACTTATGGGC TTGGAGGCGT AA
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Protein sequence | MIEIVLNGAK FNVPVKSLSE LKELALGDKE SEIYKFLEKF NATKPDIFIV DGFAIKEDSE LKDGSNVVFI RRGVMPEREV LRAMIASRNS PELNLALSKA VIGVAGLGGL GSNIALSLAR VGVKKLVLAD FDVVEPSNLN RQQYFVRHIG LKKTQALKEL INDVNPFVEV ETHDIFLDEK NVASVFGECE ILCEAFDNVA GKAMILNEAG ASLKDKKIIG ASGMAGYFSS NIIKTIKFAK NVYLCGDLTN EAKIGQGLMA PRVAVCANHE ANLAIRLLMG LEA
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