| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1132 |
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| Symbol | |
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| ID | 5597132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 92228 |
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| End bp | 93568 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640928706 |
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| Product | mate efflux family protein |
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| Protein accession | YP_001466022 |
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| Protein GI | 157165272 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0193769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAATT TGACAAACGA GCAGAGATTT TTCTCAAATA CCGACCTTGC AAGGCTCTTT
TTCCCTATCG CCGTAGAGCA GTTTTTAGAG TATAGCCTAG GCCTTGCAAA CTCGCTAATG
GCAGCAAGCG TTAGCGAAAG CGCGGTGAGT GCGGTAAGCC TTGTGGAGTT TGTCATGGCG
CTATTTATTA GCATATTTAC CGCCATAGCC ACTGGTGGCT CGGTGGTTGC TAGCCAGTAT
CTAGGCAGCA AACAAAGTGG CAACGCCAGA AATACCGCCG ATCAGCTAGT TTGGTTTAGC
CTAATTTTCG CCATCTTTAT AGCCATTGCC ATCATCCTTT TAAAAGACCT CATCTTAGAT
AAAGTCTTTG GCGATATCGG CGAGCAAGTG AGGAGCGATG CTAGCCACTA CCTCGTTTTC
TCCGCCATTT CAGCGCCCTT TTTAGCCGTC TATGCAGCAG CTGCAGCGAT CTTTCGCACG
ATGTCAAACG CAAAGCTACC TATGTATATC ATGGCGGCTG CAAATTTACT AAATGTGCTG
CTTACTGCCA TTAGCATCTA CACATTTCAC ACAGGGGTGC TTGGTATCGC CATTAGCACG
CTTATAGCTA GGGCGATCGC TTGCTTTGTC ATAGTCTATC TGCTACTTGA TATAAAGCTA
AAACTTCACA TAAGAAAGAG CCTTATCTAT AAATTTGACT ACGAGATCAT CAAGAAAATT
TTAAATATCG GCGTGCCTTA TGGCTTTGAA AATTCGATGT TTTACGTGGG TCGCATCATC
GTTTTGAGCC TTGTTTCGCT CTTTGGCACG GCAAGCATCG CTGCAAATGC CGTAGGCGGG
ACGATCGTGA TGTTTCAGGT GCTCCCTGGC ATGGCGATAG GCACAGGCCT AAGCGTCGTC
GTGGCTAGAT GCATCGGCGC AAATGACTTT AATCAGGCTA AATTTTACGT AAGAAAATCA
ATGCTAAGCA TCTATATCGT GCAGCTTTTT AGCACGGCTG TCGTGTTACT GCTTCTTGAG
CCGCTACTTC GTGTTTATAA TCTCTCAAGC GAAGCCATAA ATTTAACAAG GCAGATCGTC
TGGTATCACG GCATCGCGAT GTGCCTCATC TGGCCACTTG CCTACACCTA TCCGACCGTT
TTTCGAGCTG CTGGAGACGC AAAATATCCG ATGATAGTAA ATTTTGCCTG CAGGATCGTG
CTAGCTTATA TCTTTGCGCT TACATTTGAT CTTGGCATGA TAGGCACTTG GTTTGCGATG
TTTGCCGACT GGGCGGTAAA GGCGGTGCTC TTTGTGCGCA GATACGCAAA TGGCACGTGG
ATGAAATTTC GAGCCATTTA A
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| Protein sequence | MKNLTNEQRF FSNTDLARLF FPIAVEQFLE YSLGLANSLM AASVSESAVS AVSLVEFVMA
LFISIFTAIA TGGSVVASQY LGSKQSGNAR NTADQLVWFS LIFAIFIAIA IILLKDLILD
KVFGDIGEQV RSDASHYLVF SAISAPFLAV YAAAAAIFRT MSNAKLPMYI MAAANLLNVL
LTAISIYTFH TGVLGIAIST LIARAIACFV IVYLLLDIKL KLHIRKSLIY KFDYEIIKKI
LNIGVPYGFE NSMFYVGRII VLSLVSLFGT ASIAANAVGG TIVMFQVLPG MAIGTGLSVV
VARCIGANDF NQAKFYVRKS MLSIYIVQLF STAVVLLLLE PLLRVYNLSS EAINLTRQIV
WYHGIAMCLI WPLAYTYPTV FRAAGDAKYP MIVNFACRIV LAYIFALTFD LGMIGTWFAM
FADWAVKAVL FVRRYANGTW MKFRAI
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