| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1109 |
|---|
| Symbol | |
|---|
| ID | 5595590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 75965 |
|---|
| End bp | 76426 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640928683 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466004 |
|---|
| Protein GI | 157164654 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.925948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GTTTTACAAT GATCGAGTTG ATCTTCGTGA TCGTGATTTT AGGTATATTA
GCTGCGGTTG CTATACCAAG ACTAGCTGCA ACAAGGGACG ATGCAGAGAT AGCTAAAACT
GCTGCAAATA TACAAACGCT TGTTTCTGAC CTAGGCTCTT ACTATACTTC ACAGGGTAGT
TTTGCTGCCA CTAGCGGTAC TGGTTCTGCT GCTTCTACTA CTCCAGATAT AGCAAAAATG
ACTAATGTTT CAAATCCTGT TAAAGCTAAA AGTGATGATT GTTTAACAAT AGGAGCTATA
AAGACCGATG GTGAGATCAC CGCAACTATA GGCAAATCTG GTCTTTGTGC GCAAGTTTGG
ACATTACCAG GTTTAACAAA TGTTGAATCA ATTATAAAAA GTACTGCTAA TAACAAGACA
GTAGATACAC TTAAATTTGG TGGCATGGGT ATAAAATACT AA
|
|---|
| Protein sequence | MKKGFTMIEL IFVIVILGIL AAVAIPRLAA TRDDAEIAKT AANIQTLVSD LGSYYTSQGS
FAATSGTGSA ASTTPDIAKM TNVSNPVKAK SDDCLTIGAI KTDGEITATI GKSGLCAQVW
TLPGLTNVES IIKSTANNKT VDTLKFGGMG IKY
|
|---|
| |