| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1094 |
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| Symbol | hypD |
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| ID | 5597454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1042842 |
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| End bp | 1043930 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640929597 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001466888 |
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| Protein GI | 157164117 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0305053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTTA TCAATGACTT TCGCGATAAA AATTTAATCC TAGCCCTTTC AAAACTCATC
CAAAAAGAGA GCGTAAAACC GCTAAACATC ATGGAAATTT GCGGAGGCCA CACGCATAGC
ATTATGAAAT TCGCACTGCC AAGTTTGGTT GGAGAGCATA TAAACTTCGT CCACGGCCCA
GGCTGTCCAG TCTGCGTGAT GCCAAAAAGC CGCATAGACG AGGCCTGTAA GCTTGCTAGT
ATGGAGAATG TGATCTTTTG CACGCTAGCT GATATGCTAA GAGTGCCTGG TTCAAAGACA
AGTTTGCAAA AGCTTCGCGG CGAGGGGCAC GACATAAGGG CACTTTACAC GCCGCTTGAT
GCGCTAAATA TAGCTAAGCA AAATCCAGAC AAAAAGGTCA TATTTTTTGC GATCGGCTTT
GAGACGACGA CTCCGATGAG CGCAAATTTG GTTGAAAAAG TGGTGCAAGA GGGCATTAAA
AATTTATACT TTCATATAAA TCACGTAACC GTCCCAGCTC CAGTTAGAGC TATAATGAGC
GATGAAAATG TAAGGATAGA CGCATTTTTG GGTCCAAGTC ACGTGAGCGT GATCACGGGT
AGCAAAATTT ATAAAGAGCT AGCGAGCGAA TTTAAAAGAC CCATCGCCAT TAGTGGTTTT
GAGCCGCTTG ACATCATGGC AAGTGTGCTA AATTTAGTTC GTCAGCAAAA CGCAGGCACT
TATGAAGTCT ATAACGAGTA CGCAAGGGCG GTCAAAGAAG AGGGCAACCT CAAGGCAAAA
GAGCTCATCG CTAAGTACTT TGAGCCGTGC GACTTTGTCT GGAGAGGTCT TGGCGAGATA
GCGCAAAGCG GTATGAAGTT AAAAGACGAG TTTGCCTATC TTGACGCTAG AGTGCAGTTT
GACTGCAGCG TAGAGAGCGC TGGCGAGAGC AAGGCTTGCA TTTGTGGGCA AATTTTAAGA
GGGCTAGCAA AGCCGACTGA TTGCAAGGTC TTTGGCAAGG TCTGCAACCC ACAAAACCCG
ATAGGATCGT GCATGGTCTC AAGCGAGGGC GCTTGTGCTG CATATTTTAA ATACGCAAGA
GTTGGTTAA
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| Protein sequence | MDLINDFRDK NLILALSKLI QKESVKPLNI MEICGGHTHS IMKFALPSLV GEHINFVHGP
GCPVCVMPKS RIDEACKLAS MENVIFCTLA DMLRVPGSKT SLQKLRGEGH DIRALYTPLD
ALNIAKQNPD KKVIFFAIGF ETTTPMSANL VEKVVQEGIK NLYFHINHVT VPAPVRAIMS
DENVRIDAFL GPSHVSVITG SKIYKELASE FKRPIAISGF EPLDIMASVL NLVRQQNAGT
YEVYNEYARA VKEEGNLKAK ELIAKYFEPC DFVWRGLGEI AQSGMKLKDE FAYLDARVQF
DCSVESAGES KACICGQILR GLAKPTDCKV FGKVCNPQNP IGSCMVSSEG ACAAYFKYAR
VG
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