| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1021 |
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| Symbol | fliA |
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| ID | 5597647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1370763 |
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| End bp | 1371467 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640929933 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001467213 |
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| Protein GI | 157165349 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR01636] phage transcriptional activator, RinA family
[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000131852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGAAC TAAAGCAAAA GCAGCTTAAC GCTTATAAAA GCACCATTAA AAAAGAGCAA
GACGAGATCG TCTTAAAATA CATGCCAGCA CTGCGTGCAA TGGCGTTTAG GCTAAAGGAG
CGCTTGCCTT CAAGCATCGA CGTAAATGAT CTTATAAGCG TTGGCGTTGA GGAGATGATA
AAGCTTAGCA GGAAGTATGA CAAAGAGCAA AACGACTCAT TTTGGGGATA TGGCAAAAAG
AGAATTTATG GCTCGATGCT TGACTACCTT AGAGCGCTTG ATGTTGTTAG TAGAAGCGAC
AGAAAGCTAG TAAAGAGCAT AAATACCGAG ATAGATAACT ACTTTAACAC ACACGAAGAA
GAGCCAAGCG ACGAGTATCT GGCTGAAAAG CTAAATGAAG ATATCGAAAA GATAAGAGAG
GCAAGGGGTG TTAGTGGCAT CATTACCATT TTGCCGATCG ATGAACAAAT GGAGCTAATC
GGTCAAAGCG ATGTTGAAAA AAGCGTAGAA AAAGAGGATC TTATCTTAAA GATCGAAAGT
GCGCTAAAAG ACTTTGATGA GCGTGATCAG ATGATCGTTC AGCTTTACTA CTACGAAGAG
CTAAATTTAA AAGAGATCAG CGAGATAATG AACATCAGCG AGAGCAGAAT TTCACAAATT
CATAAACGTT TGCTTGATCG CATCAGACGC AGCTTGGGGG TTTAA
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| Protein sequence | MYELKQKQLN AYKSTIKKEQ DEIVLKYMPA LRAMAFRLKE RLPSSIDVND LISVGVEEMI
KLSRKYDKEQ NDSFWGYGKK RIYGSMLDYL RALDVVSRSD RKLVKSINTE IDNYFNTHEE
EPSDEYLAEK LNEDIEKIRE ARGVSGIITI LPIDEQMELI GQSDVEKSVE KEDLILKIES
ALKDFDERDQ MIVQLYYYEE LNLKEISEIM NISESRISQI HKRLLDRIRR SLGV
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