Gene CCC13826_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1016 
SymbolmnmA 
ID5596133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand- 
Start bp1367157 
End bp1368179 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content41% 
IMG OID640929929 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001467209 
Protein GI157165469 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TGGTTGCAAT GAGCGGCGGT GTAGATAGCA CGATGACGGC TAAATTTCTG 
CAAGAGGCTG GACATGAGGT GCAAGGCTGT TACATGATGC TTCATCAAAA GCCAGGATAT 
CACGAAGAAA ACATCAGAAA AGTCAAAAAA GTGGGCGAGT ATCTTGGCAT CAAGGTGCAT 
ATACTTGATC TGCAGGATAA ATTTAACGAA TATGTCTATG ACCCATTTGT CAGGCTCTAC 
AAAGAGGGTA AAACGCCAAA TCCTTGCGCC TTGTGTAATA AATTTATAAA GCTTGGTGCG 
CTACTTGACT TTGCAAAGGT AAATGGCTGC GAGAAGCTTG CTACTGGGCA CTACGTGCAG 
GTGGTTGATG GTTTTATAAC CTGCGCCAAG GATCCTAGCA AGGATCAAAG CTACTTTTTA 
GCTCAGGTGC CAAAAGAGGT GCTAAAAGAT GTCATTTTCC CGCTTGGAGA TAAATTTAAA 
AAAGATATAA AAGAGTTAGC AAGAGGCGTA AAAGTGCTTG AAGAGTTCGC TACTCAGGCA 
GAAAGCAGTG AAATTTGCTT TGTGGAAAAT ACCTATATTG AGGTTTTAAA CAAGCACTAC 
AACACAAATT TACCAGGCAA TGTGGTTGAT AAAGACGGCA ATATCATCGG CCGCCACCAA 
GGCTACATGC ACTACACTAT CGGCAAACGC CGTGGTTTTG AGGTTTTTGG CGCTCATGAG 
CCACACTTTG TCATCAAGAT AAATGCCGAA AAAAACGAGA TCGTTGTCGG CACGAAGGAT 
GACCTTGCTC AAAAAGTTGT AGAGCTTGAA AATGTAAATT TATTTATAGA TGAAGATAAA 
TTTGAGTGCG AAACCAAGAT AAGATATAGA AGCCCTAAAC TTGAGGCTTT TGTAGAGGTT 
GATAAATCTA GCAAAACCGC AAAGCTAACG CTAAATCAAA ACGCACTTGG CGTGGCTCAA 
GGTCAGCTTT GTGTGATGTA TGATGGTGAT CGCGTCATCG CAAGTGGCTT TATAAAGAAC 
TAA
 
Protein sequence
MKIMVAMSGG VDSTMTAKFL QEAGHEVQGC YMMLHQKPGY HEENIRKVKK VGEYLGIKVH 
ILDLQDKFNE YVYDPFVRLY KEGKTPNPCA LCNKFIKLGA LLDFAKVNGC EKLATGHYVQ 
VVDGFITCAK DPSKDQSYFL AQVPKEVLKD VIFPLGDKFK KDIKELARGV KVLEEFATQA 
ESSEICFVEN TYIEVLNKHY NTNLPGNVVD KDGNIIGRHQ GYMHYTIGKR RGFEVFGAHE 
PHFVIKINAE KNEIVVGTKD DLAQKVVELE NVNLFIDEDK FECETKIRYR SPKLEAFVEV 
DKSSKTAKLT LNQNALGVAQ GQLCVMYDGD RVIASGFIKN