| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1006 |
|---|
| Symbol | |
|---|
| ID | 5597297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 432928 |
|---|
| End bp | 433827 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640929020 |
|---|
| Product | tartrate dehydratase subunit alpha |
|---|
| Protein accession | YP_001466329 |
|---|
| Protein GI | 157164721 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAG AAAAAGCTGT GCAAAAAATG ACTGAAGTCA TGGCGAAATT TGTCGGCTAC
ACGGGCAAGG TGCTACCTGA TGACGTGACG GCGAAGCTAC TTGAGCTTAG CGAGCGCGAG
ACGCAGCCAC TGGCAAAGGA GATCTATAAA ACAATGTTTG AAAACCAGCG CCTTGCAAAG
GAGCTAAACC GCCCGTCCTG TCAGGATACT GGAGTGATCC AGTTTTTCGT AAAATGTGGT
GCAAATTTCC CACTCATCGG CGAGCTTGAA GAGTTGCTGC GAGAGGCGGT ACTGCAGGCT
ACTCGTGAAG CTCCGCTTCG CCATAACAGC GTCGAGACAT TTGACGAGTA TAACACAGGC
AAAAATGTCG GCAAGGGCAC GCCGAGTGTG TTTTGGGATA TCGTGCCAGG TAGTAGCGAG
TGCGAGATAC ACACCTATAT GGCAGGTGGC GGCTGTAGCC TGCCTGGCAA AGCGACCGTT
TTGATGCCTG GCATGGGCTA TGAGGGTGTT GTTAAATTTG TCATGGATAT AATGACAAGT
TACGGTATAA ACGCCTGTCC GCCGCTATTA GTGGGTGTTG GCGTGGGCAC TTCGATCGAC
GTAGCGTCGC TGTTATCCAA AAAAGCGCTG ATGAGACCTT TGGGCTCTAA AAATCCAAAC
GAACGAGCCG CACTAACCGA AAAACTGCTA GAAGATGGCA TCAATAAAAT CGGCTTTGGA
CCACAAGGTA TGAGCGGTGC AAGCTCTGTA ATGGGCGTGC ATATAGAAAA CTGCGCTCGC
CATCCAAGCG TCATAGCCGT CGCCGTAAAC GTGGGCTGCT GGTCGCACCG TAAAGGCCAC
ATCGTCTGGG ACGCAGATCT AAATTTCGAC GTAAAATCGC ACAAGGAGTT CGCGCTATGA
|
|---|
| Protein sequence | MDKEKAVQKM TEVMAKFVGY TGKVLPDDVT AKLLELSERE TQPLAKEIYK TMFENQRLAK
ELNRPSCQDT GVIQFFVKCG ANFPLIGELE ELLREAVLQA TREAPLRHNS VETFDEYNTG
KNVGKGTPSV FWDIVPGSSE CEIHTYMAGG GCSLPGKATV LMPGMGYEGV VKFVMDIMTS
YGINACPPLL VGVGVGTSID VASLLSKKAL MRPLGSKNPN ERAALTEKLL EDGINKIGFG
PQGMSGASSV MGVHIENCAR HPSVIAVAVN VGCWSHRKGH IVWDADLNFD VKSHKEFAL
|
|---|
| |