| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1000 |
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| Symbol | yvfE |
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| ID | 5597369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 425745 |
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| End bp | 427424 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640929014 |
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| Product | pyridoxal phosphate-dependent enzyme |
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| Protein accession | YP_001466323 |
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| Protein GI | 157165181 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.921099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTC TTACAAGTTT ATCCGAGAGT ACGCAGTTTT TCTTACAATT AATCGTCGTG
CTCGGCTGTT TGTTCTACGG AGCAAAAAAA GGTGGTATGG CACTTGGTGT CCTTGGTGGC
ATCGGTCTTG TTATTTTGGT ATTTGCATTT GATTTAAAAC CAGGTAAGCC TGCTATTGAT
GTTATATTAA CTATTCTTGC AGTTGTTGTA GCAAGTGCTA CACTTCAAGC GGCTGGTGGT
CTTGATGTTA TGCTTCAGAT CGCTGAAAGA GCGCTTAGAA AACATCCAAG AACAGTTTGT
TATCTTGCAC CGATTTGTGG CTGGACACTA ACAGTGCTTT GCGGTACAGG TCACACAGTT
TATACACTTT TACCGATCAT CTATGACGTA TCAATGAAAA GTGGTATCCG TCCAGAACGT
CCGATGGCAG CTACTACGAT CTCGTCACAA CTTGCTATTA TCGCAAGCCC GGTTTCAGTT
GCTGGTGTGT CTATGGTTGC TGTTCTTCTT GGTACTGGCA CAGTTCATAT TGAGGGCTTT
ACAAGCTATG TTGATCTACT AAAAGTTACT ATCCCTTCTA CATTTTTGGG CGTGCTTTGT
ATAGGAACTT ACTCAGTATT TAGAGGCAAA GACCTTGATA AAGATCCAGA ATTTCAAGCT
AAGATCGCTG ACCCTGAGCA AAGAAAATAT ATCTATGGCT CTGACGAGTC TCATTCGCTA
ATCGGCGTAA AACTACCTAA GAAACAATGG AACATCATGT GGATATTCCT TGCTACCATC
GCTGTCGTTG CGGTTCTAGG CTATTACAAA CAACTTCGCC CAAGCTGGAC AAGCAATGTT
CCTGGTAAAT CAATAGAAAT AATCGTAGAT AAAAAAACAG TTAAAAACAT CACTGTTAAA
GACGGACAAG TTGTTTCTAT GGTTGGTGAT AGTAAGATCG TCTCAAACGT AAAAGACAAT
AAAGTAAAAG ACGCTACTAA ATTTACAAGC GTTCAAGTGC TAGATAAAGA CAATAAAGTA
ACACAAAGCA TTGTTTCAAA TGGCGCTGAT GTTGTTATCA CAGCAGGTGA TAAAAGCGAA
ACTATCGCAA ACGCTAACAT AGTAGTAAAA GATACTATGA AAAAGACTGC GCCACTTGGC
ATGGTTGATA CGATCCAAAT TTTCATGCTT TTAGCAGCAT CTATCATGAT GATCTACTCA
GGCATTAAAG CAGCCAAGAT CGGTCAAAAT GAAATTTTCC ACAGCGGCAT GGTTGCACTT
GTTGCGATTT ACGGCATTAG CTGGATGGCT GAGACAATGT TCAACTCACA CATTGATATG
CTTAAAGGCT CACTTGGCGA GGTTATGAAA GCATATCCTT GGATGTATAT CATAGTTGGT
ATGCTTATAT CAAAATTCCT AAACTCTCAA GCTGCTGCAG CTGCGACTTT CGTGCCACTC
GCTGTTCAAA TAGGCGTTCA CCCAGGCGTT ATTGTCGCGT TTGCTACTGC TTGCTATGGA
TACTTCATCC TTCCAACATA TCCAAGCGAC CTTGCAGCCG TGCAGTTTGA CCGCTCAGGC
ACAACACATA TTGGTAAATA TGTAATCAAC CACAGCTTTA TCATACCTGG TTTCATAGGT
GTATTTAGCT CTTGTGCTGT TGGCTGGGTG CTAGCAAATA TATACGGATA TCTTAACTAA
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| Protein sequence | MEFLTSLSES TQFFLQLIVV LGCLFYGAKK GGMALGVLGG IGLVILVFAF DLKPGKPAID
VILTILAVVV ASATLQAAGG LDVMLQIAER ALRKHPRTVC YLAPICGWTL TVLCGTGHTV
YTLLPIIYDV SMKSGIRPER PMAATTISSQ LAIIASPVSV AGVSMVAVLL GTGTVHIEGF
TSYVDLLKVT IPSTFLGVLC IGTYSVFRGK DLDKDPEFQA KIADPEQRKY IYGSDESHSL
IGVKLPKKQW NIMWIFLATI AVVAVLGYYK QLRPSWTSNV PGKSIEIIVD KKTVKNITVK
DGQVVSMVGD SKIVSNVKDN KVKDATKFTS VQVLDKDNKV TQSIVSNGAD VVITAGDKSE
TIANANIVVK DTMKKTAPLG MVDTIQIFML LAASIMMIYS GIKAAKIGQN EIFHSGMVAL
VAIYGISWMA ETMFNSHIDM LKGSLGEVMK AYPWMYIIVG MLISKFLNSQ AAAAATFVPL
AVQIGVHPGV IVAFATACYG YFILPTYPSD LAAVQFDRSG TTHIGKYVIN HSFIIPGFIG
VFSSCAVGWV LANIYGYLN
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