| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0890 |
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| Symbol | |
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| ID | 5596249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 647901 |
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| End bp | 649850 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640929223 |
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| Product | MadN protein |
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| Protein accession | YP_001466531 |
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| Protein GI | 157164294 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00448941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTAT TTAAACAGAT TATGATCGCT GTGATAGCTT TTGGCATCGT GATTTTTATG
GCTGTTGGCT ACTTAAATTT TAAGAGCCTA AATGGATACA TCAACGACCA GCTCGGTGAA
AACGCAAGGC ACACAGCAAA CTCGCTTGGA CTTGCTTTAA AGCCGATTGT TGATCCTGAG
GATATGTCTT TGGCACAAAC GATGATAAAT TCTATGTTTG ATAGCGGCAG ATACAAGCTC
ATTAAACTTG AAGACGTCGA TGGTAAGGTG CTCATAGAAA ATTCTCAACA AACTATCGTT
AAAGATATCC CTGAGTGGTT TTATAAGATC GCTAAATTTG AAGCTCCTGT TGCAACTAGC
GAGATCATGA CTGGCTGGGC AAAATTTGGC ACTTTATATG TTCAAGGCAG CACAGCACTT
GCCTACAATG AGCTTTACTC AAACTCAAAA AATATTTTTA ACTTTCTAGC TTTAATGATC
ATCATCGCTC TTGTCGTGGC ATTTTTTGCT CTTAAGGCGA TATTTAGACC ACTTGTTAAG
GTTCAGGATC AAGCTGAAGC GATACTTGAT AATAAATTTA TCATCCAAAA GAGAATTCCA
TTCACAACAG ACCTTAAAAA GATGGTGCTT GCCATGAACT CGATGGTTAG CAAGGTTCAA
GACATATTTG AAAGAGAGGC CGCAACACTT AGCAAGTATC AAGAGCTTTT ATATAAAGAC
TCTATGAGCG GCACTTACAA TAGAAGATTT TTTCAAACTA AATTTAGTGA GTATCTAGCA
AGTGAAGAGT ATTCAAGCGG TGTTGCATCA CTTGTTAGCT TTAAAGATCT AGCTGGGCTA
AAAGGCGTTC TTGGCTTTGA AAAATGGCAA AGTGTCATCA TAAAAATAGC CCAAATTTTA
CAAGAAAAAT CTACCGAAAA TGACCAAAAT GCGATCGTTG CAAGGCTAAA CGACAACGAC
TTTATCTTGC TTTCTTACGG TAAAAACTCA TCAAATTTCT CAGCTTTAGA CGATAAGATC
ATGGCTGAGT TTAAAAAACT CTATGCAAAT TTCTCTATAA ATGATAGTGA ATGCCCAGTC
AATGCTGCTA TTGTTGAGTA CTCGCCAAGC ACTGATATGA GGACACTACT TACGTCTGCT
GACGTCACTT TGGCTAGTGC AAGACTGGCT GGCTGCTTTA CTTGCAAGGA ATTTAATGCA
AATCAAAACA CCTTAGTCAT CGGCAAAGAG AAATACAAAG AGCTTATCTT TGACTCTATA
AAAGAGGATA AATTTAAATT TGCAGCTCAA AAAGTAGTTG GTTTTGACTC AAACTTTGAG
CAGTACGAAC TCTATCTAAG GCTAGTTGAT AGCGAGGGCA AATGGCGTAT GGCATCATAC
TTTATGCCAA TGGTAAATGA GTTAAATTTA GGTGCGATGC TCGATCTTCA TATCCTAAAT
AGAATCGCTA GAATTTTGCC TGAAAATATC TTGCCTCAAG GAAGCTTGGC GATAAATTTG
GGTAAAGAGA TATTAAGCTC GGATGAGAAT TTCTCAAAAC TTGAAGCTAC GCTTAAGAAA
ATCGCTCAAA TTTCAAAATC TAAAAACTAT ATAGAAATTC CAAACAAAGA CGATATTAGT
ATCGAAAGTA TAGTTAGACT TACTAAAAAA TTAAAAGAAC TCGGCTTTGG TTTTGGATTT
GACCACTTTG ATCTTAATGC AAAAGGCATT GAGAAGCTAA AAGAATTTAA TCCAGACTAT
GTAAAGATCC AGTCAAGCGT CTTAATTGAC TTTTTAAGTG ATAAATCAGG AGCAAATACA
AAACAATCAC TAGATGTTGT TTTAAGCTCA AAAGATATCA TTTTGATTGC GATCGGTGTT
GAGAGCGAAG AGCAAAAGAG TAAGCTAATT GAGCTTGGCA TTAAAAATAT GCAAGGAATT
TACATAGATG AAATCAAAAA TATTGGATGA
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| Protein sequence | MTLFKQIMIA VIAFGIVIFM AVGYLNFKSL NGYINDQLGE NARHTANSLG LALKPIVDPE
DMSLAQTMIN SMFDSGRYKL IKLEDVDGKV LIENSQQTIV KDIPEWFYKI AKFEAPVATS
EIMTGWAKFG TLYVQGSTAL AYNELYSNSK NIFNFLALMI IIALVVAFFA LKAIFRPLVK
VQDQAEAILD NKFIIQKRIP FTTDLKKMVL AMNSMVSKVQ DIFEREAATL SKYQELLYKD
SMSGTYNRRF FQTKFSEYLA SEEYSSGVAS LVSFKDLAGL KGVLGFEKWQ SVIIKIAQIL
QEKSTENDQN AIVARLNDND FILLSYGKNS SNFSALDDKI MAEFKKLYAN FSINDSECPV
NAAIVEYSPS TDMRTLLTSA DVTLASARLA GCFTCKEFNA NQNTLVIGKE KYKELIFDSI
KEDKFKFAAQ KVVGFDSNFE QYELYLRLVD SEGKWRMASY FMPMVNELNL GAMLDLHILN
RIARILPENI LPQGSLAINL GKEILSSDEN FSKLEATLKK IAQISKSKNY IEIPNKDDIS
IESIVRLTKK LKELGFGFGF DHFDLNAKGI EKLKEFNPDY VKIQSSVLID FLSDKSGANT
KQSLDVVLSS KDIILIAIGV ESEEQKSKLI ELGIKNMQGI YIDEIKNIG
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