| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0888 |
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| Symbol | |
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| ID | 5596796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 645545 |
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| End bp | 647224 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640929221 |
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| Product | ComEC/Rec2 family protein |
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| Protein accession | YP_001466529 |
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| Protein GI | 157165135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00289662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TGTTAGCAAT TAGTGCTTTG GCCGCAGCAA CGTTGCTGTC TGCTCAAGAT
GTCCCTTATA GGATTTTTCT AGCTTCATTC GCTCAAGATG ATAGCGCTGC TAGAATCGAT
AGTGCTGTTA GCAAAGTAAA CAGCAAAATA TCAGATAGCA GACTAACTAC TGGCGTTTAT
GAAGTTGGTG GAAGAAAGTT TTTATATGTT GATACAACTC CAGTTTCTGA AAATGAAGCT
AATGAGTTGT TAGCTAAAGT TCAAAATGAG TCAGGTTATA AAGATGCTTT AATGAGAGCT
AAGTCACCTG TAACAAATGC TCAGTCAGCT AAAAAATCTA ATATAGAGCA AACTATATCA
GCAGAGCCTA AAGCAGCAGC TACAGCACAA GCTGATGATA GTGTATTGAC TTTGGAACAA
GTTGTAAAAA CTATTTTAAA TGAAAACCCA AGCTTAAAAG CTACAGAATT TAACTACTTA
CAAGTAGGCA AAGATCTAAA AATAGCTAAA AATGCCTACT ATCCAACACT TGATGCAGCT
GCTAGAGTAG GATACGAGAG AAAACGTCTT GATGATGGTC TTACAACAAG AAGAGGCGAT
GGCAGAGTAT CTGGCGCATC TTTAACTTTA GTTGAAAACC TTTATAATGG TGGCGCTGAT
AAAAACAGAA TCAACTCTCA AAGCGCAAGA CTTGACTCAG CTGCTTACAC AGTTGCTCAA
GCTGCAGATA GACTAACACT AAGCGCTGCA AATGCTTATC TACAAGTTCT TCAAACAAAG
AGAATTCTTG ACATTGAAGA AGAAAACGTA AAAAGCCATG AAGAAATTTA TAGTCAGATC
AAAGATAGAG CAAGATCAGG TTATGGTGTA GCTTCTGAAG AGAGACAAGC TGGATCACGC
TATACTTTGG CTCAATCAAA CTATATAGCT GCAAAAAATA ACTATGAAGA CGCACTTTCT
ACATTTGAAA AACTATATGG AAGAAAAGTT GCTGCTAAAA ACCTAGTAAT GCCTGAATTT
AACCTGCCAT TACCAAGCAC TAAAGAGGCT GTTTATGATA AAGCTGTTCT TTGTAACCCA
ACACTTCTAG TTCAAAGATC AAACATCGCT ATGGCAGAGT CTGTTGTAAA AGAGAAAAAT
GCACCATTCT TACCAAAACT AGATCTTGTT GTGTCAGGTG CTTATGATCA CTCAAATGTT
TTATATGATG ATTATGAAGA GCAAACATTT GACGCTCTTT TAAGATTAAA CTATAACCTT
TACAATAAAG GTAATGATAA GCTTGATAAA GAGAAGAGCC AACTTGCTGT TCAACAAGAG
CAACAAACTA TGGATAACCT TGTAAGAGAG CTTAAAGAGT CTTTAGAATT CTCATGGCAA
AACTATGTTC TTAACCAAGA AAAAATGGGA TATCTAAATC AACACGTTGA ATATGCAAAG
GCAACTCTTG ATGCATACCA AGATGAGTTT AGAATCGGTC GCCGCGACCT TATCAACCTA
CTTGATGCAG AAAACGAGTA CAACACAGCT TTAAAAGAGA TCGCTACAAC AGAGACTGCA
CTATCTTATG CAAAATATAG ATTGCTAGAT AACATGGGTA TGGTTTCAGA TAGTTTTGAA
CCAGGCTTTG CTAAGAGATA TATTCAAGGC GCTTGCAGTA TTCAAAACGA CTTAAGATAA
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| Protein sequence | MKKMLAISAL AAATLLSAQD VPYRIFLASF AQDDSAARID SAVSKVNSKI SDSRLTTGVY
EVGGRKFLYV DTTPVSENEA NELLAKVQNE SGYKDALMRA KSPVTNAQSA KKSNIEQTIS
AEPKAAATAQ ADDSVLTLEQ VVKTILNENP SLKATEFNYL QVGKDLKIAK NAYYPTLDAA
ARVGYERKRL DDGLTTRRGD GRVSGASLTL VENLYNGGAD KNRINSQSAR LDSAAYTVAQ
AADRLTLSAA NAYLQVLQTK RILDIEEENV KSHEEIYSQI KDRARSGYGV ASEERQAGSR
YTLAQSNYIA AKNNYEDALS TFEKLYGRKV AAKNLVMPEF NLPLPSTKEA VYDKAVLCNP
TLLVQRSNIA MAESVVKEKN APFLPKLDLV VSGAYDHSNV LYDDYEEQTF DALLRLNYNL
YNKGNDKLDK EKSQLAVQQE QQTMDNLVRE LKESLEFSWQ NYVLNQEKMG YLNQHVEYAK
ATLDAYQDEF RIGRRDLINL LDAENEYNTA LKEIATTETA LSYAKYRLLD NMGMVSDSFE
PGFAKRYIQG ACSIQNDLR
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