| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0859 |
|---|
| Symbol | |
|---|
| ID | 5597112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 620643 |
|---|
| End bp | 621200 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929197 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466505 |
|---|
| Protein GI | 157165071 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3056] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0197883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAT TTAAATTTCT AGCTATCTTT GGACTTTTTG TCCTATTCTT GAGCGGTTGT
GCGCCTACTC AGACAGTAGT TGCCTTTGAT CCTTACAAAA CTGCTGCAAG TCAGCAAGCT
AACGGCCTTG AAGTCTATAT AAGCGCGGTG CATGATAGTC GCAAAAATAA AAGTACTATT
GCAACTATAA CCGATGGCAG AGGCACTGTA AAAGAGTATG TCGTGCTTCA AAACGATCTT
GCGACTTATT TTAGCGACTC CCTTAAAAGA GAGCTTGCGG CACGTGGCGC AAATGTAAAT
GGCATGGGTG GCGTTGTGGT TGAAGTTTTC ATAAACGAAT TTGAAGCAAA TATGAGCGGA
TATGGCAGCG ACAACACAAA GGGCAAGATA AAGATCACTC TTAAAATCCA AAAAGGCGAT
CAAAGCATCA TCAAAAATAT CTCAAACAAC CAAACCAAAT TTGAGCTAGT TCGCACTGGC
GGAGCATTTA AGCCATTCTT AACAGACATC ATAAATGACG CTGTTAAGCG CTCTGCGATC
GCTATCTTAA ATAGCTGA
|
|---|
| Protein sequence | MSKFKFLAIF GLFVLFLSGC APTQTVVAFD PYKTAASQQA NGLEVYISAV HDSRKNKSTI
ATITDGRGTV KEYVVLQNDL ATYFSDSLKR ELAARGANVN GMGGVVVEVF INEFEANMSG
YGSDNTKGKI KITLKIQKGD QSIIKNISNN QTKFELVRTG GAFKPFLTDI INDAVKRSAI
AILNS
|
|---|
| |