Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0855 |
Symbol | lepA |
ID | 5595835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 617560 |
End bp | 619350 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640929193 |
Product | GTP-binding protein LepA |
Protein accession | YP_001466501 |
Protein GI | 157164531 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0509078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA TTAGAAACTT TAGCATCATC GCTCACATTG ACCACGGCAA AAGCACGCTT GCTGACCGTC TCATTCAGGA GTGTGGCGCC GTAAGTGACC GTGAGATGAG CTCGCAAATC ATGGACACGA TGGACATCGA AAAAGAGCGT GGCATCACGA TCAAAGCCCA GTCTGTCCGC CTAAATTACG CACTAAATGG GCAAAATTTT GTTCTAAATT TGATAGACAC CCCAGGACAC GTTGATTTTA GCTACGAGGT AAGCCGTAGC CTAGCTAGTT GCGAGGGCGC GCTGCTTGTC GTGGATGCTA GCCAGGGCGT GGAGGCGCAA ACCATCGCAA ACGTCTATAT CGCGCTTGAA AACAACCTAG AGATCATCCC AGTCATCAAC AAGATCGACC TGCCAGCGGC TGACCCTGCT AGGGTAAAAG ACGAGATCGA GCACATCATC GGACTTGACT GCTCAGGAGC GATCGAAGTG AGCGCAAAAA CAGGCGTTGG CATAAAGGAG CTGCTTGAAG CGATCATTAC GAGGATCCCA GCGCCAAATG GCGACGTAAG CAAGCCTACA AAGGCGCTAA TCTACGATAG TTGGTTTGAC AACTACCTTG GCGCGCTTGC TCTTGTGCGC GTTTATGATG GTGAAATTTC AAAAAATGAT GAAATTTTGG TCATGGGCAC AGGTAAAAAA CACATTGTGC TTGACCTCAT GTATCCAAAT CCTATAGCAC CCATCAAGAC CAAAACGCTT AGCGCTGGCG AGGTCGGCAT CGTTGTTTTG GGGCTTAAAA ACGTTAGCGA CGTGCAAGTT GGTGATACGA TAACGCAGTC AAGAAATCCT CTAAAAGAGC CAGTTGGTGG CTTTGAGAGG GCTAAGCCGT TTGTTTTTGC GGGGCTTTAT CCTATTGAAA CTGATAAATT TGAAGATCTG CGTGACGCGC TGGATAAGCT AAAGCTAAAT GACAGCTCCA TTAGCTACGA GCCAGAGACC TCGGTCGCAC TTGGATTTGG CTTTAGGGTT GGCTTTTTAG GTCTTCTTCA TATGGAGGTC GTCAAAGAGA GGTTGGAGCG TGAGTTTGAC CTTGATCTCA TCGCCACAGC GCCAACTGTG ACTTATGAAG TCATCCAAAC TGATGGGCTA AATTTAAAAA TTCAAAACCC AAGCCAGCTG CCACCAGTCA ATAAAATAGA CTCAATCCTT GAGCCGTACG TGAAAGCGAC TATCATCACG CCAAGCGAGT TTTTGGGTAA CATCATCACG CTTTTAAACA ACCGCCGCGG CATACAAACA AAGATGGACT ACATCACGAC TGACCGCGTT TTACTTGAGT ATGACATACC GATGAATGAG ATCGTGATGG ACTTTTATGA CAAGCTAAAA TCAAGCACCA AAGGCTACGC GAGCTTTGAC TATGAACCTA GCGACTACCG CGTGGGCGAT CTAGTAAAGC TTGATGTCAA AGTGGCCGGC GAGACGGTCG ATGCGCTCTC TATCATCGTG CCTGAGAGCA AGGCGCAGAC AAAGGGCAGG GACTTCGTAA AGGCGATGAA AGAGATCGTG CCGCGCCAGC TCTTTGAAGT GGCGATACAA GCGAGCATCG GTAATAAAAT AATCGCCCGA GAAACTGTAA AATCAATGGG TAAAAACGTC ACAGCTAAGT GCTACGGCGG TGATATCACT CGTAAGAGGA AGTTGCTAGA AAAGCAAAAA GAGGGTAAGA AGCGTATGAA GGCCATAGGT AAGGTGAATT TGCCGCAGGA GGCGTTTTTA TCCGTCCTAA AAATAGACTA G
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Protein sequence | MKNIRNFSII AHIDHGKSTL ADRLIQECGA VSDREMSSQI MDTMDIEKER GITIKAQSVR LNYALNGQNF VLNLIDTPGH VDFSYEVSRS LASCEGALLV VDASQGVEAQ TIANVYIALE NNLEIIPVIN KIDLPAADPA RVKDEIEHII GLDCSGAIEV SAKTGVGIKE LLEAIITRIP APNGDVSKPT KALIYDSWFD NYLGALALVR VYDGEISKND EILVMGTGKK HIVLDLMYPN PIAPIKTKTL SAGEVGIVVL GLKNVSDVQV GDTITQSRNP LKEPVGGFER AKPFVFAGLY PIETDKFEDL RDALDKLKLN DSSISYEPET SVALGFGFRV GFLGLLHMEV VKERLEREFD LDLIATAPTV TYEVIQTDGL NLKIQNPSQL PPVNKIDSIL EPYVKATIIT PSEFLGNIIT LLNNRRGIQT KMDYITTDRV LLEYDIPMNE IVMDFYDKLK SSTKGYASFD YEPSDYRVGD LVKLDVKVAG ETVDALSIIV PESKAQTKGR DFVKAMKEIV PRQLFEVAIQ ASIGNKIIAR ETVKSMGKNV TAKCYGGDIT RKRKLLEKQK EGKKRMKAIG KVNLPQEAFL SVLKID
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