Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0768 |
Symbol | |
ID | 5596693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 311970 |
End bp | 312659 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640928910 |
Product | response regulatory protein |
Protein accession | YP_001466220 |
Protein GI | 157164544 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.319158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATG CATTAGAATT AAAAAATATT TGTAAAATTT TTGGCGATGT AAAAGCACTT GATGATATAA GTTTTGAGGT TAAAAAGGGC GAGTGGGTCA GCGTCATGGG ACCAAGCGGT AGCGGCAAGA GCACACTTGT AAATATCCTT TCTCTAATGG ATACTCCAAG TAGCGGCGTT TATATGCTTG GTGGCGATGA TGCGAGCAAT CTAAATGCGG ACGATACGCT TAAATTTAGA CGTGAAAAGA TCGGCCTTAT ATTCCAGCAG TTTCACCTCG TGCCGTATCT TAGTGCCCTT GAAAACGTGA TGATAGCGCA GTATTATCAC AGCTCAGTGG ACGAAGAGGA CGCTAAAAGA GCGCTTGAGG CAGTTGGACT TTCTCACAGG CTCACGCATA GACCAAGCCA GCTAAGTGGT GGCGAGCAGC AACGCCTTTG TATCGCACGC TCACTCATAA ACGACCCTGA AATTTTAATA GCAGACGAGC CAACTGGTAA CCTTGACGAG GCAAATGAGA GGATCATACT TGATCTATTT TGCAAGCTAA GAAAAGATGG CAAGACGATA CTTCTAGTCA CGCACAACCC AGATTTGGGC GAGTACGGCG ATAAGATCGT ATATCTAAGA CACGGCAAGT TAGAGAAAAT TCGCACTATC GAAAATCCAA AGGTGCCAAA TGAAATTTAA
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Protein sequence | MQNALELKNI CKIFGDVKAL DDISFEVKKG EWVSVMGPSG SGKSTLVNIL SLMDTPSSGV YMLGGDDASN LNADDTLKFR REKIGLIFQQ FHLVPYLSAL ENVMIAQYYH SSVDEEDAKR ALEAVGLSHR LTHRPSQLSG GEQQRLCIAR SLINDPEILI ADEPTGNLDE ANERIILDLF CKLRKDGKTI LLVTHNPDLG EYGDKIVYLR HGKLEKIRTI ENPKVPNEI
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