Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0767 |
Symbol | |
ID | 5596953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 310826 |
End bp | 311968 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640928909 |
Product | integral membrane protein-permease component, involved in lipoprotein release |
Protein accession | YP_001466219 |
Protein GI | 157164311 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.016013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAA ATAGCAAATT CTTTTACAAT ATAATCTACA AAAGCCTAAA AAATGGCTCA TCAAGGGTTA TGGTTATCGT CATCTCGATC TTGCTTGGAG CGTGCGTGTG TGCGGCATTT GTCAATGTCT ATCTTGACAT CGACTCAAAA GTCTCGCGCG AGCTAAAAAC TTATGGTGCA AATATGATCT TTGCTCCAAA AGATATGGTG ACAAGTGATG ATATGAGCGA AAAAACTTAT AATGAAATGA TCGCTAAAGT GCCAAAGGAT AAGCTTCTTG GCGAGAGTGG ATATCTCTTT GCTCAGGCAA ATATCGGTCC GGCAAACGCC ATCGTCATGG GGACAAAATT TAGCAATCTA AAAAAAGTTA AACCATTTTT AGATGTTAGA GATGGAACTA TGATAAATGT TGATTTTGAC GATAAAAACG TGCTAATAGG CGTCGATCTT GCTCGTCAAG CTGGCTTTAA AGCAGGCGAT GATATAGAAA TTCGCGCTAT TGGCTCAAAT GAGAGCATAA ATGTAAAGAT AAAAGGCGTA GTGGCAAGTG GCGACAAAGA AGATGCTCTT TTGATCACGT CGCTATCTTT GGCTCAGCAA ATTTCAAACA AAGCTGGCAA GATAAACTAT GCTGAAGCTG TTGTGCTTGG AAATTTTGAC GAGATAACAT CGCTTGCAAA GACTATTAGC AACGACGAAA TAGTCGCAAA ACCAGTGGCA AAGGTCTCAA AGTCTGAGGG CTACATCTTA GAAAAGATCA AGCTTCTAAT GGCGCTTGTT AGCCTTGTCA TCTTGCTCAT TACTTCAATG TGCGTAAATA CAACGCTTAG TGCTATCTTG CTCTCTCGAT CACGTGAGAT CGCACTTCTT AGAGCCATAG GCGCTAGCAA GAAAGATGTG CTAAGGCTAT TTGGCTTTGA GACATTTGCA ACAGCGCTCA TTTCGGCGTT AATCGGAGCA TTTTTAGGTT ATCTACTAGC TCAAATTTTA GGATATGCGA TATTTGATTC TAGTATTGAT TTTAGGATTT TAAGTATCCC AGTGGCTGTG GTCATATCGC TTCTTTTTGC AGCGATCGCG GCGTTTTATC CGATCAAACG GGCACTTAAT AACAAAATGG CAGATACATT AAGAGGAGAA TGA
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Protein sequence | MTANSKFFYN IIYKSLKNGS SRVMVIVISI LLGACVCAAF VNVYLDIDSK VSRELKTYGA NMIFAPKDMV TSDDMSEKTY NEMIAKVPKD KLLGESGYLF AQANIGPANA IVMGTKFSNL KKVKPFLDVR DGTMINVDFD DKNVLIGVDL ARQAGFKAGD DIEIRAIGSN ESINVKIKGV VASGDKEDAL LITSLSLAQQ ISNKAGKINY AEAVVLGNFD EITSLAKTIS NDEIVAKPVA KVSKSEGYIL EKIKLLMALV SLVILLITSM CVNTTLSAIL LSRSREIALL RAIGASKKDV LRLFGFETFA TALISALIGA FLGYLLAQIL GYAIFDSSID FRILSIPVAV VISLLFAAIA AFYPIKRALN NKMADTLRGE
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