| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0766 |
|---|
| Symbol | |
|---|
| ID | 5597443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 309547 |
|---|
| End bp | 310839 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640928908 |
|---|
| Product | ABC transport permease protein |
|---|
| Protein accession | YP_001466218 |
|---|
| Protein GI | 157165412 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0486768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TGCAACTAAG AATGATAAAA AGCTCGATCA CGGGCTCAAA GGTGCAAAAG
ACGATGGCGT TTATCACCAT CTTGCTAGCT GCTCTTTTGA TAGCTTGCAT GCTAAATATC
ACGCTTAAAA TCGGCGATCA AGTGGCAAGC GAGCTTAGAG GCTATGGCTC AAATATCGTC
GTTTTACCAC GCGGTGAGAG CCTAAGCATC GAGATCGAGG GTAAAAATTT CACCCCACTA
AAATCACAAA ATTTACTCCC AGAGGCTGAT ATTTACAAGA TAAAAGAGAT CTTTTGGAGA
AATAATATCG TTGCCTTTGC GCCGTTTTTA GAGACAAAGG TAAAAGACGC TAAAGGCGAT
GAGTTTAGCC TTGAGGGGAC ATATTTTGAT AAAAATATCG GACTAAAAGA CGAGCCAGAA
TTTAGCACAG GCGTTAAGAG TTTGTATGGA TTTTGGGGTG TTGAAGGCGC TTGGCCAAAA
GATGAGAGCA TGGATGAAAT TTTAGTCGGC GATGAGCTTG CAAAGGCTAA AAATTTAAAA
GTTGGCGACA AGCTTAGCCT TGCTGGCAAA AACGGCACAA GAGAGGTTAG CGTAGTTGGT
ATCTTAAAGG GTGCAGGCGA CGAGACGCAT AAGCTAATAG GCTCGCTCAA ACTTGCTGGT
GATCTCTCAG GTCACGCTGG CTCATATACA AAAGCTGAAG TCTCAGCCAT GACGATCCCA
GAAAACGACC TATCGCTAAA GGCTAGAAGA AATTTAGACA ACCTTGATAG CGCAGAGTAT
GATAAATGGT ACTGCTCGGC CTATGCAGGC TCGATCGCAT TTCAGATAGA GGAGAACCTG
CCAAACGTTA GCGCAAAGGC AAGCCTTCAA GTAAGTGATG CGGAGAGTAA TATCGTAAAG
AAAATTCAAA GCCTAATGGG TATCGTTAGT ATCATAGCCC TTGTGGTTTC AGCCATCGGC
ATAACGTCGC TAATGACAAG TGAAATTTAC CGCCGTAAAA AAGAGATCGG CCTTTTAAAA
GCCATAGGCG CAAGTAACTT TGAAATTTAC GCCCTTTTTG CTAGCGAGAG CCTTGTGGTG
GCATTTTTTG CAGGCATCAC GGGAGCATTT TTAGGATACG CGCTAAGCTA CGTGATGTCT
TACATCATCT TTTCTCACGG CATCGGTATA GCGTGGATCG TGTTGCCAAT AAGCGTGGCA
TTTGCCTTGC TCATCTCAGT CGTTGGCTCG CTAATGCCAA TGAGAAACGT CATAAATTTA
CTACCTGCGG AGGTGCTATA TGACCGCAAA TAG
|
|---|
| Protein sequence | MKNMQLRMIK SSITGSKVQK TMAFITILLA ALLIACMLNI TLKIGDQVAS ELRGYGSNIV
VLPRGESLSI EIEGKNFTPL KSQNLLPEAD IYKIKEIFWR NNIVAFAPFL ETKVKDAKGD
EFSLEGTYFD KNIGLKDEPE FSTGVKSLYG FWGVEGAWPK DESMDEILVG DELAKAKNLK
VGDKLSLAGK NGTREVSVVG ILKGAGDETH KLIGSLKLAG DLSGHAGSYT KAEVSAMTIP
ENDLSLKARR NLDNLDSAEY DKWYCSAYAG SIAFQIEENL PNVSAKASLQ VSDAESNIVK
KIQSLMGIVS IIALVVSAIG ITSLMTSEIY RRKKEIGLLK AIGASNFEIY ALFASESLVV
AFFAGITGAF LGYALSYVMS YIIFSHGIGI AWIVLPISVA FALLISVVGS LMPMRNVINL
LPAEVLYDRK
|
|---|
| |