Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0763 |
Symbol | sodB |
ID | 5596154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 305634 |
End bp | 307577 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640928905 |
Product | superoxide dismutase |
Protein accession | YP_001466215 |
Protein GI | 157165701 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.745778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TTTTTAAATT TATGCTTATC ATGCTACTTC CTATCTGGCT TGTGGCAAAA AATGACGACT ACACACAAGT CGCAGCTCAG ATAAAAGAGT CATTACAAAA AGTAATAACA GAGTATAGAG CTGGCAATGT CGAGCAAGCA GTTAGCGATA CTCAAAATGC TTATTTTGGT CTGTTTGAAG ATGTCGAAGC TGGCATCAGA ATAAATTTAG GTCAGAAAAA AGCTTACTCT ATGGAGAAGC AGTTTGGCGA GATCAGAAAG GCGATAAAAG CTGGCGAAAC ACCAGATGAT GTGCAAAAAA GAATAGATCA GATAAATAGC GAAATCGCTG AAGTTTTGCC AGTTATTTTA AATGGACATA AGCTTGTTGG TGAGTACTCA GACAGCCCAG CACAAGCTGC TGCAAGTGGC TATGACACTT CTAAATTTAT CCCTGAGTGG AAGGTGGCAT TTGAAAATTT ATCAGCTGCT CTAGATAAAG CTATAGCAAG CTACGAGGGC GATAAACAAG ATGATGCTAA AAATTCTATC CAAGATGCTA AATTTAATGA TTATAGAAAC ACTCAACTTG AAATTGCCGT TCGCCAATAT ATAGAAAATG GCAAAAGCAT AGATGCTGAC ATCCAAAGAA AGATGGGTGA AGCGATCAGT GGCATCACAA ATGGCATAAG CAAAGATGAC TTTAAAGTAA AGCTAGAAGA GATCAAAAAA CTAGCTTATG ATGCCGTTGC AAAACTCCCA GCTGAAACAG TAAAACTAGC AAAAGTTGAT ATGAGTAGTG CAGCATCTAG CGATAGCAGC GAAGATAGTG GTACAGACTA CACTCAAACT GTTAAAAACA TAAATGATAA AATTCAAGCA GCCATCGCGC TTTACAAAGG TGGCAATAGC GCTAAAGCTA TGGGCGATAT CCAAGACATC TACTTTGATG AGTTTGAAGG TAGCGGCATG GAGAACAAAG TAGGTGCGAT AGATGTAAAT TTAAAAACAG CTATCGAAGC TACATTTGGT AACCTTGTAG CCCTTATGAA ATCAGGTGCA GACGAAAAAA CACTTGAAGA GAGTGCAAGC AAGATGTCAT CTCAGCTAGC AGCCGCACTT GAGAAAACTA GCGGTTCAAG CTCACCTTGG ACACTATTTA TCTGGGCACT AACTATCATC TTAAGAGAGG GTTTTGAAGC TCTTATCATC GTTGCAGCCG TCGTTGCATA TCTTGTAAAA ACTGGCAATG CAAAATCTAT GGGCAAGGTC GTATATAGCT CAGTTGGCGT GGCTGTCATC TTAAGCTTTG TCATGGCTTG GATAATGAAC GTCATCTTTG GCGAGGCAGC AGGTCAAAAA AGAGAGCTTA TGGAAGGCAT CACGATGCTT GTTGCAGTGG GACTTCTATT TTATGTTGGC TTCTGGCTTC TTTCAAATGC TGGCGCTAAA AAATGGAACG ACTACATCAA ATCTCACTTA TCTGAGTCTA TCTCAAGTGG CTCAAGCACG ATGCTTTGGT GGACTGTATT TTTAGCGGTA TTTAGAGAGG GCGCTGAGAC AGTGCTATTT TATCAAGCGC TTATCTTTGA CGCAAAAGAC TCAGCTGGCT ACTCAATGAT CGCAGCTGGC TTTGTTGTAG GTCTTATCGT TCTTTTAATA GTCTATTTCT TATTTAAAAT TTTCGCTATT AAAATTCCTA TTAAGCCATT TTTTATATTT ACATCAGCGA TCATCTTTTA CATGTCGATC GTCTTTGTTG GCAAGGGTGT TGGCGAGCTA GTTGAGGGCA AAATTTTCAT CCCAACTATC ATAAAAGGAC TAAATTTTCC TGACTGGATG AGAGACTGGC TAGGACTTAT GCCATATTAC GAGAGTTTAA TACCTCAAAT CATTATGGTG CTTGCCCTAA TTATAGGCAT CGTTATTATG AAATCAAAAC AAAATAAAAA CTAA
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Protein sequence | MNKFFKFMLI MLLPIWLVAK NDDYTQVAAQ IKESLQKVIT EYRAGNVEQA VSDTQNAYFG LFEDVEAGIR INLGQKKAYS MEKQFGEIRK AIKAGETPDD VQKRIDQINS EIAEVLPVIL NGHKLVGEYS DSPAQAAASG YDTSKFIPEW KVAFENLSAA LDKAIASYEG DKQDDAKNSI QDAKFNDYRN TQLEIAVRQY IENGKSIDAD IQRKMGEAIS GITNGISKDD FKVKLEEIKK LAYDAVAKLP AETVKLAKVD MSSAASSDSS EDSGTDYTQT VKNINDKIQA AIALYKGGNS AKAMGDIQDI YFDEFEGSGM ENKVGAIDVN LKTAIEATFG NLVALMKSGA DEKTLEESAS KMSSQLAAAL EKTSGSSSPW TLFIWALTII LREGFEALII VAAVVAYLVK TGNAKSMGKV VYSSVGVAVI LSFVMAWIMN VIFGEAAGQK RELMEGITML VAVGLLFYVG FWLLSNAGAK KWNDYIKSHL SESISSGSST MLWWTVFLAV FREGAETVLF YQALIFDAKD SAGYSMIAAG FVVGLIVLLI VYFLFKIFAI KIPIKPFFIF TSAIIFYMSI VFVGKGVGEL VEGKIFIPTI IKGLNFPDWM RDWLGLMPYY ESLIPQIIMV LALIIGIVIM KSKQNKN
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